SMTL ID : 5wsg.1

Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolution

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY 4.00 Å
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-4-1-2-2-2-2-2-2-2-1-1-1-1-mer
Ligands
1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
6 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
6 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Yan, C. et al., Structure of a yeast step II catalytically activated spliceosome. Science (2017)
Release Date
2017-01-25
Peptides
Pre-mRNA-splicing factor 8: A
Pre-mRNA-splicing factor SNU114: B
Pre-mRNA-splicing factor CWC21: C
Pre-mRNA-splicing factor PRP46: D
Pre-mRNA-processing protein 45: E
Pre-mRNA-splicing factor SLT11: F
Pre-mRNA-splicing factor CWC2: G
Pre-mRNA-splicing factor CWC15: H
Pre-mRNA-splicing factor BUD31: I
Pre-mRNA-splicing factor CWC22: J
Pre-mRNA-splicing factor CEF1,Pre-mRNA-splicing factor CEF1,Cef1,Pre-mRNA-splicing factor CEF1: Q
Pre-mRNA-splicing factor CLF1,Pre-mRNA-splicing factor CLF1,Clf1: R
Pre-mRNA-splicing factor SYF2: S
Syf1,Pre-mRNA-splicing factor SYF1,Syf1,Pre-mRNA-splicing factor SYF1,Syf1,Pre-mRNA-splicing factor SYF1,Syf1: T
Pre-mRNA-processing factor 17: U
Pre-mRNA-processing factor 19: VWXY
Pre-mRNA-splicing factor SNT309: Z
Small nuclear ribonucleoprotein-associated protein B: 07
Small nuclear ribonucleoprotein E: 18
Small nuclear ribonucleoprotein F: 29
Small nuclear ribonucleoprotein G: 3a
Small nuclear ribonucleoprotein Sm D3: 4b
Small nuclear ribonucleoprotein Sm D1: 5c
Small nuclear ribonucleoprotein Sm D2: 6d
U2 small nuclear ribonucleoprotein B'': e
U2 small nuclear ribonucleoprotein A': f
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16: h
Pre-mRNA-splicing factor 18: i
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
C
C
J
D
O
E
P
F
Q
G
R
H
S
I
T
J
Z
Q
c
R
d
S
I
T
v
U
n
V
o
W
p
X
q
Y
r
Z
t
0
k
7
F
1
i
8
G
2
h
9
H
3
j
a
K
4
l
b
U
5
m
c
V
6
g
d
W
e
X
f
Y
h
e
i
f

Pre-mRNA-splicing factor 8

Pre-mRNA-splicing factor SNU114

Pre-mRNA-splicing factor CWC21

Pre-mRNA-splicing factor PRP46

Pre-mRNA-processing protein 45

Pre-mRNA-splicing factor SLT11

Pre-mRNA-splicing factor CWC2

Pre-mRNA-splicing factor CWC15

Pre-mRNA-splicing factor BUD31

Pre-mRNA-splicing factor CWC22

Pre-mRNA-splicing factor CEF1,Pre-mRNA-splicing factor CEF1,Cef1,Pre-mRNA-splicing factor CEF1

Pre-mRNA-splicing factor CLF1,Pre-mRNA-splicing factor CLF1,Clf1

Pre-mRNA-splicing factor SYF2

Syf1,Pre-mRNA-splicing factor SYF1,Syf1,Pre-mRNA-splicing factor SYF1,Syf1,Pre-mRNA-splicing factor SYF1,Syf1

Pre-mRNA-processing factor 17

Pre-mRNA-processing factor 19

Pre-mRNA-splicing factor SNT309

Small nuclear ribonucleoprotein-associated protein B

Small nuclear ribonucleoprotein E

Toggle Identical (18)

Small nuclear ribonucleoprotein F

Toggle Identical (29)

Small nuclear ribonucleoprotein G

Toggle Identical (3a)

Small nuclear ribonucleoprotein Sm D3

Toggle Identical (4b)

Small nuclear ribonucleoprotein Sm D1

Toggle Identical (5c)

Small nuclear ribonucleoprotein Sm D2

U2 small nuclear ribonucleoprotein B''

U2 small nuclear ribonucleoprotein A'

Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

Pre-mRNA-splicing factor 18

Related Entries With Identical Sequence

3jcm.1 | 5gam.1 | 5gan.1 | 5gao.1 | 5gap.1 | 5gm6.1 | 5gmk.1 | 5lj3.1 | 5lj5.1 | 5mps.1 | 5mq0.1 | 5nrl.1 | 5y88.1 | 5ylz.1 | 5zwm.1 | 5zwn.1 | 5zwo.1 | 6bk8.1 | 6exn.1 | 6g90.1 | 6j6g.1 | 6j6h.1 | 6j6n.1 | 6j6q.1 | 6n7p.1 | 6n7r.1 | 6n7x.1 | 7b9v.1 | 7dco.1