SMTL ID : 5he1.1

Human GRK2 in complex with Gbetagamma subunits and CCG224062

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.15 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x ZS2: (4~{S})-4-[4-fluoranyl-3-(isoquinolin-1-ylmethylcarbamoyl)phenyl]-~{N}-(1~{H}-indazol-5-yl)-6-methyl-2-oxidanylidene-3,4-dihydro-1~{H}-pyrimidine-5-carboxamide(Non-covalent)

ZS2.1: 22 residues within 4Å: Chain A: I.169, G.170, R.171, G.172, F.174, G.175, E.176, V.177, A.190, L.194, L.207, E.211, V.227, L.243, D.244, L.245, M.246, A.293, N.294, L.296, S.306, D.307 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:V.177, A:V.177, A:L.207, A:V.227, A:L.243, A:L.296, A:L.296 Hydrogen bonds: A:R.171, A:F.174, A:G.175, A:D.244, A:M.246, A:N.294, A:D.307 pi-Stacking: A:F.174 pi-Cation interactions: A:K.192

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 6 residues within 4Å: Chain A: H.320, E.332, V.333, Q.335, V.338, Y.340 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.320, A:E.332, A:V.333, A:Q.335, A:V.338

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Waldschmidt, H.V. et al., Structure-Based Design, Synthesis, and Biological Evaluation of Highly Selective and Potent G Protein-Coupled Receptor Kinase 2 Inhibitors. J.Med.Chem. (2016)

Release Date

2016-05-11

Peptides

Beta-adrenergic receptor kinase 1: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
G

Beta-adrenergic receptor kinase 1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Related Entries With Identical Sequence