SMTL ID : 5hx6.2 (1 other biounit)

Crystal structure of RIP1 kinase with a benzo[b][1,4]oxazepin-4-one

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

monomer

Ligands

1 x 65U: 5-benzyl-N-[(3S)-5-methyl-4-oxo-2,3,4,5-tetrahydro-1,5-benzoxazepin-3-yl]-1,2-oxazole-3-carboxamide(Non-covalent)

65U.1: 21 residues within 4Å: Chain A: I.52, M.53, K.54, M.76, L.79, V.84, V.85, L.87, L.99, V.100, M.101, L.138, V.143, H.145, I.163, A.164, D.165, L.166, L.168, S.170, F.171 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:K.54, A:K.54, A:L.79, A:L.138, A:V.143, A:D.165, A:L.166 Hydrogen bonds: A:L.87, A:D.165 pi-Stacking: A:F.171

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Harris, P.A. et al., DNA-Encoded Library Screening Identifies Benzo[b][1,4]oxazepin-4-ones as Highly Potent and Monoselective Receptor Interacting Protein 1 Kinase Inhibitors. J.Med.Chem. (2016)

Release Date

2016-03-02

Peptides

Receptor-interacting serine/threonine-protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Receptor-interacting serine/threonine-protein kinase 1

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