SMTL ID : 5tx5.1

Rip1 Kinase ( flag 1-294, C34A, C127A, C233A, C240A) with GSK772

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.56 Å

Oligo State

homo-dimer

Ligands

2 x 7MJ: 3-benzyl-N-[(3S)-5-methyl-4-oxo-2,3,4,5-tetrahydro-1,5-benzoxazepin-3-yl]-1H-1,2,4-triazole-5-carboxamide(Non-covalent)

7MJ.1: 20 residues within 4Å: Chain A: V.40, I.52, K.54, M.76, L.79, V.84, V.85, L.87, L.99, V.100, M.101, L.138, H.145, I.163, A.164, D.165, L.166, L.168, S.170, F.171 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.40, A:K.54, A:L.79, A:V.84, A:L.138, A:D.165, A:L.166, A:L.166 Hydrogen bonds: A:L.87, A:D.165 7MJ.2: 17 residues within 4Å: Chain B: I.52, M.53, K.54, L.79, V.85, L.87, L.99, M.101, V.143, H.145, I.163, A.164, D.165, L.166, L.168, S.170, F.171 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:K.54, B:K.54, B:L.79, B:V.143, B:D.165, B:L.166 Hydrogen bonds: B:D.165 Water bridges: B:L.87, B:L.87

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Harris, P.A. et al., Discovery of a First-in-Class Receptor Interacting Protein 1 (RIP1) Kinase Specific Clinical Candidate (GSK2982772) for the Treatment of Inflammatory Diseases. J. Med. Chem. (2017)

Release Date

2017-07-05

Peptides

Receptor-interacting serine/threonine-protein kinase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Receptor-interacting serine/threonine-protein kinase 1

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