SMTL ID : 6ocq.2 (1 other biounit)

Crystal structure of RIP1 kinase in complex with a pyrrolidine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.79 Å

Oligo State

monomer

Ligands

1 x M5J: 1-[(2S)-2-(3-fluorophenyl)pyrrolidin-1-yl]-2,2-dimethylpropan-1-one(Non-covalent)

M5J.1: 10 residues within 4Å: Chain A: M.76, L.79, V.85, L.87, M.101, L.138, I.163, A.164, D.165, F.171 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:M.76, A:L.79, A:L.79, A:L.87, A:L.138, A:D.165, A:F.171 Hydrogen bonds: A:D.165

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: V.258, I.261, E.263, C.265 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.263, A:C.265

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Harris, P.A. et al., Discovery and Lead-Optimization of 4,5-Dihydropyrazoles as Mono-Kinase Selective, Orally Bioavailable and Efficacious Inhibitors of Receptor Interacting Protein 1 (RIP1) Kinase. J.Med.Chem. (2019)

Release Date

2019-05-08

Peptides

Receptor-interacting serine/threonine-protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Receptor-interacting serine/threonine-protein kinase 1

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