SMTL ID : 5ipj.1

Crystal structure of human Pim-1 kinase in complex with a quinazolinone-pyrrolopyrrolone inhibitor.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x 6CD: 2-(tert-butylamino)-3-methyl-8-[(6R)-6-methyl-4-oxo-1,4,5,6-tetrahydropyrrolo[3,4-b]pyrrol-2-yl]quinazolin-4(3H)-one(Non-covalent)

6CD.1: 16 residues within 4Å: Chain A: L.25, F.30, V.33, A.46, K.48, E.70, I.85, L.101, E.102, R.103, V.107, D.109, N.153, L.155, I.166, D.167 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.30, A:A.46, A:I.85, A:L.101, A:R.103, A:L.155 Hydrogen bonds: A:D.167 Water bridges: A:D.167, A:F.168

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: D.89, W.90, F.91 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.90 GOL.3: 4 residues within 4Å: Chain A: P.104, E.105, D.157, R.160 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.105, A:E.105, A:R.160, A:R.160 GOL.4: 1 residues within 4Å: Chain A: N.141 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.141, A:N.141

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pettus, L.H. et al., Discovery and Optimization of Quinazolinone-pyrrolopyrrolones as Potent and Orally Bioavailable Pan-Pim Kinase Inhibitors. J.Med.Chem. (2016)

Release Date

2016-06-22

Peptides

Serine/threonine-protein kinase pim-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase pim-1

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