SMTL ID : 5j1e.2 (1 other biounit)

Crystal Structure of a Hydroxypyridone Carboxylic Acid Active-Site RNase H Inhibitor in Complex with HIV Reverse Transcriptase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-1-1-mer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: D.445, E.480, D.500 Ligands: MG.2, 6FT.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.445, A:E.480, A:D.500, A:D.500 MG.2: 5 residues within 4Å: Chain A: D.445, D.500, D.551 Ligands: MG.1, 6FT.3 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.445, A:D.551

1 x 6FT: 5-hydroxy-4-oxo-1-[(4'-sulfamoyl[1,1'-biphenyl]-4-yl)methyl]-1,4-dihydropyridine-3-carboxylic acid(Non-covalent)

6FT.3: 10 residues within 4Å: Chain A: D.445, E.480, D.500, Q.502, A.540, H.541, K.542, D.551 Ligands: MG.1, MG.2 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:H.541

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kankanala, J. et al., Design, Synthesis, and Biological Evaluations of Hydroxypyridonecarboxylic Acids as Inhibitors of HIV Reverse Transcriptase Associated RNase H. J.Med.Chem. (2016)

Release Date

2016-06-15

Peptides

HIV-1 REVERSE TRANSCRIPTASE P66 DOMAIN: A
HIV-1 REVERSE TRANSCRIPTASE P51 DOMAIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

HIV-1 REVERSE TRANSCRIPTASE P66 DOMAIN

HIV-1 REVERSE TRANSCRIPTASE P51 DOMAIN

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