- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.70 Å
- Oligo State
- homo-pentamer
- Ligands
- 5 x 6GK: 6-(2-methoxyphenyl)-N~4~,N~4~-bis[(pyridin-2-yl)methyl]pyrimidine-2,4-diamine(Non-covalent)
- 5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.2: 2 residues within 4Å:- Chain A: N.74, S.76
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.74
NAG.8: 2 residues within 4Å:- Chain B: N.74, S.76
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:N.74, B:S.76
NAG.9: 2 residues within 4Å:- Chain C: N.74, S.76
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:S.76
NAG.12: 3 residues within 4Å:- Chain D: N.74, S.76, H.77
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:S.76, D:S.76
NAG.15: 3 residues within 4Å:- Chain E: N.74, S.76, H.77
1 PLIP interactions:1 interactions with chain E- Hydrogen bonds: E:S.76
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.3: 7 residues within 4Å:- Chain A: R.11, V.82, S.83
- Chain E: D.25, V.26, I.27, H.153
6 PLIP interactions:4 interactions with chain A, 2 interactions with chain E- Hydrogen bonds: A:S.83, A:S.83, A:S.83, E:I.27
- Salt bridges: A:R.11, E:H.153
PO4.4: 7 residues within 4Å:- Chain A: D.25, V.26, I.27, H.153
- Chain B: R.11, V.82, S.83
5 PLIP interactions:2 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:S.83, A:D.25, A:I.27
- Salt bridges: B:R.11, A:H.153
PO4.5: 8 residues within 4Å:- Chain A: F.60, Q.62, A.95, A.96, P.103, I.125, Q.127, I.148
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:Q.62, A:Q.127, A:Q.127
- Water bridges: A:A.96
PO4.10: 7 residues within 4Å:- Chain B: D.25, V.26, I.27, H.153
- Chain C: R.11, V.82, S.83
5 PLIP interactions:2 interactions with chain B, 3 interactions with chain C- Hydrogen bonds: B:I.27, C:S.83, C:S.83
- Salt bridges: B:H.153, C:R.11
PO4.13: 7 residues within 4Å:- Chain C: D.25, V.26, I.27, H.153
- Chain D: R.11, V.82, S.83
7 PLIP interactions:3 interactions with chain C, 4 interactions with chain D- Hydrogen bonds: C:D.25, C:I.27, D:S.83, D:S.83, D:S.83
- Salt bridges: C:H.153, D:R.11
PO4.16: 7 residues within 4Å:- Chain D: D.25, V.26, I.27, H.153
- Chain E: R.11, V.82, S.83
6 PLIP interactions:4 interactions with chain E, 2 interactions with chain D- Hydrogen bonds: E:S.83, E:S.83, E:S.83, D:I.27
- Salt bridges: E:R.11, D:H.153
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kaczanowska, K. et al., Substituted 2-Aminopyrimidines Selective for alpha 7-Nicotinic Acetylcholine Receptor Activation and Association with Acetylcholine Binding Proteins. J. Am. Chem. Soc. (2017)
- Release Date
- 2017-03-08
- Peptides
- Acetylcholine-binding protein: ABCDE
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
FB
GC
HD
IE
J
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.70 Å
- Oligo State
- homo-pentamer
- Ligands
- 5 x 6GK: 6-(2-methoxyphenyl)-N~4~,N~4~-bis[(pyridin-2-yl)methyl]pyrimidine-2,4-diamine(Non-covalent)
- 5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kaczanowska, K. et al., Substituted 2-Aminopyrimidines Selective for alpha 7-Nicotinic Acetylcholine Receptor Activation and Association with Acetylcholine Binding Proteins. J. Am. Chem. Soc. (2017)
- Release Date
- 2017-03-08
- Peptides
- Acetylcholine-binding protein: ABCDE
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
FB
GC
HD
IE
J