- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.65 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x 6JB: [(2R)-2-{2-[hydroxy(methyl)amino]-2-oxoethyl}-5-(3-methoxyphenyl)pentyl]phosphonic acid(Non-covalent)
- 2 x MN: MANGANESE (II) ION(Non-covalent)
MN.2: 6 residues within 4Å:- Chain A: K.139, D.165, S.166, E.167, E.249
- Ligands: 6JB.1
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:D.165, A:E.167, A:E.167, A:E.249
MN.13: 6 residues within 4Å:- Chain B: K.139, D.165, S.166, E.167, E.249
- Ligands: 6JB.12
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:D.165, B:E.167, B:E.167, B:E.249
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 10 residues within 4Å:- Chain A: S.166, E.167, C.202, S.203, S.204, H.269, C.272, I.274, H.275
- Ligands: 6JB.1
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.166, A:S.203, A:I.274, A:H.275
GOL.14: 10 residues within 4Å:- Chain B: S.166, E.167, C.202, S.203, S.204, H.269, C.272, I.274, H.275
- Ligands: 6JB.12
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:S.166, B:S.203, B:I.274
- 18 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.4: 9 residues within 4Å:- Chain A: V.143, S.144, A.145, G.146, F.147, N.347, F.348, P.350, T.351
Ligand excluded by PLIPEDO.5: 6 residues within 4Å:- Chain A: S.191, I.196, N.197, V.259, D.260, D.263
Ligand excluded by PLIPEDO.6: 5 residues within 4Å:- Chain A: K.198, E.265
- Chain B: P.314, L.315, D.316
Ligand excluded by PLIPEDO.7: 4 residues within 4Å:- Chain A: L.330, K.337, Y.340, I.344
Ligand excluded by PLIPEDO.8: 1 residues within 4Å:- Chain A: E.395
Ligand excluded by PLIPEDO.9: 2 residues within 4Å:- Chain A: Y.291, K.313
Ligand excluded by PLIPEDO.10: 4 residues within 4Å:- Chain A: A.342, K.345, L.382, E.383
Ligand excluded by PLIPEDO.11: 6 residues within 4Å:- Chain A: D.176, K.179, N.194, N.195, F.280
- Chain B: R.307
Ligand excluded by PLIPEDO.15: 9 residues within 4Å:- Chain B: V.143, S.144, A.145, G.146, F.147, N.347, F.348, P.350, T.351
Ligand excluded by PLIPEDO.16: 3 residues within 4Å:- Chain B: K.36, I.37, E.38
Ligand excluded by PLIPEDO.17: 6 residues within 4Å:- Chain B: S.191, I.196, N.197, V.259, D.260, D.263
Ligand excluded by PLIPEDO.18: 3 residues within 4Å:- Chain B: E.265, V.266, Y.340
Ligand excluded by PLIPEDO.19: 3 residues within 4Å:- Chain B: N.154, I.155, K.157
Ligand excluded by PLIPEDO.20: 4 residues within 4Å:- Chain B: T.25, N.29, R.32, Q.58
Ligand excluded by PLIPEDO.21: 5 residues within 4Å:- Chain B: Q.341, A.342, K.345, Y.349, L.382
Ligand excluded by PLIPEDO.22: 8 residues within 4Å:- Chain A: Q.173, C.174, L.175, D.176
- Chain B: Q.173, C.174, L.175, D.176
Ligand excluded by PLIPEDO.23: 3 residues within 4Å:- Chain B: N.218, T.220, N.223
Ligand excluded by PLIPEDO.24: 4 residues within 4Å:- Chain B: Q.388, Q.403, I.404, W.407
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sooriyaarachchi, S. et al., Targeting an Aromatic Hotspot in Plasmodium falciparum 1-Deoxy-d-xylulose-5-phosphate Reductoisomerase with beta-Arylpropyl Analogues of Fosmidomycin. Chemmedchem (2016)
- Release Date
- 2016-08-24
- Peptides
- 1-deoxy-D-xylulose 5-phosphate reductoisomerase, apicoplastic: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.65 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x 6JB: [(2R)-2-{2-[hydroxy(methyl)amino]-2-oxoethyl}-5-(3-methoxyphenyl)pentyl]phosphonic acid(Non-covalent)
- 2 x MN: MANGANESE (II) ION(Non-covalent)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 18 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sooriyaarachchi, S. et al., Targeting an Aromatic Hotspot in Plasmodium falciparum 1-Deoxy-d-xylulose-5-phosphate Reductoisomerase with beta-Arylpropyl Analogues of Fosmidomycin. Chemmedchem (2016)
- Release Date
- 2016-08-24
- Peptides
- 1-deoxy-D-xylulose 5-phosphate reductoisomerase, apicoplastic: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B