SMTL ID : 5jd4.3 (3 other biounits)

Crystal structure of LAE6 Ser161Ala mutant, an alpha/beta hydrolase enzyme from the metagenome of Lake Arreo, Spain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: P.268, K.296, H.333 Chain B: Q.318, K.321 7 PLIP interactions: 3 interactions with chain A, 4 interactions with chain B Water bridges: A:K.296, B:K.321, B:K.321 Salt bridges: A:K.296, A:H.333, B:K.321 Hydrogen bonds: B:Q.318 SO4.2: 5 residues within 4Å: Chain A: Q.318, K.321 Chain B: P.268, K.296, H.333 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:Q.318 Salt bridges: A:K.321, B:K.296, B:H.333

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: E.70, V.71, E.73, V.74, R.125 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.70, A:V.71, A:R.125, A:R.125 Water bridges: A:V.71, A:A.72 GOL.4: 5 residues within 4Å: Chain A: A.83, R.141, P.149, A.150, D.153 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.141, A:R.141, A:D.153, A:D.153 Water bridges: A:A.150 GOL.7: 8 residues within 4Å: Chain A: R.284, D.288, I.291, Y.299 Chain B: R.284, D.288, I.291, Y.299 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:R.284, B:R.284, A:R.284, A:R.284 GOL.8: 4 residues within 4Å: Chain B: E.70, V.71, V.74, R.125 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:E.70, B:V.71, B:R.125, B:R.125 GOL.9: 3 residues within 4Å: Chain B: D.32, G.228, Y.229 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:D.32, B:Y.229 Water bridges: B:D.35, B:G.228

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 1 residues within 4Å: Chain A: R.280 Ligand excluded by PLIP CL.10: 1 residues within 4Å: Chain B: R.126 Ligand excluded by PLIP

2 x BEN: BENZAMIDINE(Non-functional Binders)

BEN.6: 9 residues within 4Å: Chain A: G.109, G.110, G.111, A.182, A.183, A.212, L.231, M.236, H.307 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.182, A:A.183, A:A.212, A:L.231, A:L.231 Hydrogen bonds: A:G.110, A:G.111, A:A.183, A:H.307 BEN.11: 9 residues within 4Å: Chain B: G.109, G.110, G.111, A.182, A.183, A.212, L.231, M.236, H.307 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:A.182, B:A.183, B:A.212, B:L.231, B:L.231 Hydrogen bonds: B:G.110, B:G.111, B:A.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martinez-Martinez, M., Crystal structure of LAE6 Ser161Ala mutant, an alpha/beta hydrolase enzyme from the metagenome of Lake Arreo, Spain. To Be Published

Release Date

2016-05-04

Peptides

LAE6: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
F

LAE6

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