SMTL ID : 5jkr.1 (1 other biounit)

vaccinia virus D4/A20(1-50)w43a mutant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: G.173, K.174, T.175, Y.194, H.195, A.198 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.174, A:T.175, A:T.175, A:T.175, A:H.195 SO4.2: 5 residues within 4Å: Chain A: Y.84, P.85, S.102, H.195 Ligands: SO4.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.102 Salt bridges: A:H.195 SO4.3: 8 residues within 4Å: Chain A: G.80, D.82, P.83, Y.84, P.92, F.93, N.134 Ligands: SO4.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:F.93, A:N.134 SO4.4: 3 residues within 4Å: Chain A: T.99, K.100, K.101 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.101 Water bridges: A:S.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Contesto-Richefeu, C. et al., Structural analysis of point mutations at the Vaccinia virus A20/D4 interface. Acta Crystallogr.,Sect.F (2016)

Release Date

2016-09-14

Peptides

Uracil-DNA glycosylase: A
DNA polymerase processivity factor component A20: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Uracil-DNA glycosylase

DNA polymerase processivity factor component A20

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