SMTL ID : 5lxg.1

Revised crystal structure of the human adiponectin receptor 1 in an open conformation

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.73 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: S.117, H.121, D.138, H.267, H.271 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.121, A:H.267, A:H.271

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: S.50, F.51, R.52 Chain C: H.30 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain C Hydrogen bonds: A:F.51, A:R.52 Salt bridges: C:H.30 SO4.3: 3 residues within 4Å: Chain A: R.52 Chain C: N.28, H.30 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain A Hydrogen bonds: C:N.28 Salt bridges: C:H.30, A:R.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vasiliauskaite-Brooks, I. et al., Structural insights into adiponectin receptors suggest ceramidase activity. Nature (2017)

Release Date

2017-03-22

Peptides

Adiponectin receptor protein 1: A
V REGION HEAVY CHAIN: B
V REGION LIGHT CHAIN: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

C
L

Membrane

We predict this structure to be a membrane protein.
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Adiponectin receptor protein 1

V REGION HEAVY CHAIN

V REGION LIGHT CHAIN

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