SMTL ID : 5mco.1

CRYSTAL STRUCTURE OF BACE-1 IN COMPLEX WITH ACTIVE SITE INHIBITOR GRL-8234 AND EXOSITE PEPTIDE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

hetero-1-1-mer

Ligands

1 x BSD: N-{(1S,2R)-1-benzyl-2-hydroxy-3-[(3-methoxybenzyl)amino]propyl}-5-[methyl(methylsulfonyl)amino]-N'-[(1R)-1-phenylethyl]benzene-1,3-dicarboxamide

BSD.1: 25 residues within 4Å: Chain A: G.27, Q.28, G.29, L.46, D.48, G.50, S.51, P.86, Y.87, T.88, Q.89, F.124, I.126, W.131, I.134, Y.214, D.244, S.245, G.246, T.247, T.248, N.249, R.251, S.341, A.351 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:L.46, A:L.46, A:Y.87, A:Y.87, A:Q.89, A:F.124, A:F.124, A:I.126, A:W.131, A:Y.214, A:T.248, A:A.351 Hydrogen bonds: A:D.48, A:T.88, A:Q.89, A:Q.89, A:D.244, A:G.246, A:G.246, A:T.247, A:T.248, A:N.249, A:N.249, A:S.341 Water bridges: A:S.52, A:T.248

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ruderisch, N. et al., Potent and Selective BACE-1 Peptide Inhibitors Lower Brain A beta Levels Mediated by Brain Shuttle Transport. EBioMedicine (2017)

Release Date

2017-09-27

Peptides

Beta-secretase 1: A
BACE-1 EXOSITE PEPTIDE: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Beta-secretase 1

BACE-1 EXOSITE PEPTIDE

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