SMTL ID : 5moh.1

Crystal structure of CK2alpha with ZT0583 bound.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.38 Å

Oligo State

monomer

Ligands

1 x YTX: 2-(3-methoxy-4-oxidanyl-phenyl)ethanoic acid(Non-covalent)

YTX.1: 10 residues within 4Å: Chain A: V.65, K.67, I.94, F.112, E.113, H.114, V.115, M.162, I.173, D.174 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.65, A:I.94, A:F.112, A:F.112, A:I.173 Hydrogen bonds: A:V.115, A:D.174 Water bridges: A:E.80, A:W.175 Salt bridges: A:K.67

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 6 residues within 4Å: Chain A: K.76, R.79, R.154, L.177, N.188, R.190 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:N.188 Water bridges: A:R.154 Salt bridges: A:R.79, A:R.154 ACT.3: 7 residues within 4Å: Chain A: Q.35, Y.38, I.68, V.100, D.102, P.103, A.109 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Q.35, A:Y.38, A:V.100 Hydrogen bonds: A:Q.35, A:D.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

De Fusco, C. et al., A fragment-based approach leading to the discovery of a novel binding site and the selective CK2 inhibitor CAM4066. Bioorg. Med. Chem. (2017)

Release Date

2017-05-24

Peptides

Casein kinase II subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Casein kinase II subunit alpha

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