SMTL ID : 5n87.1

TTK kinase domain in complex with NTRC 0066-0

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.29 Å

Oligo State

monomer

Ligands

1 x N66: ~{N}-(2,6-diethylphenyl)-2-[[2-methoxy-4-(4-methylpiperazin-1-yl)phenyl]amino]-5,6-dihydropyrimido[4,5-e]indolizine-7-carboxamide(Non-covalent)

N66.1: 20 residues within 4Å: Chain A: I.36, S.38, G.39, S.42, V.44, Q.46, A.56, K.58, I.91, E.108, C.109, G.110, N.111, I.112, D.113, A.156, N.157, L.159, I.168 Ligands: PGF.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:A.56, A:I.91, A:L.159 Hydrogen bonds: A:G.110, A:G.110 Water bridges: A:Q.46, A:K.120

1 x PGF: 2,5,8,11-TETRAOXATRIDECANE(Non-covalent)

PGF.2: 12 residues within 4Å: Chain A: K.58, V.60, Y.73, E.76, M.105, M.107, I.168, D.169, A.173, N.174, Q.175 Ligands: N66.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.58

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 5 residues within 4Å: Chain A: E.76, D.169, G.171, I.172, A.173 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.76, A:D.169, A:G.171, A:I.172, A:A.173

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Uitdehaag, J.C.M. et al., Target Residence Time-Guided Optimization on TTK Kinase Results in Inhibitors with Potent Anti-Proliferative Activity. J. Mol. Biol. (2017)

Release Date

2017-05-31

Peptides

Dual specificity protein kinase TTK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dual specificity protein kinase TTK

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