SMTL ID : 5ndt.1

Crystal structure of human Pim-1 kinase in complex with a consensus peptide and fragment like molecule (E)-3-(2-(thiophen-2-yl)vinyl)-3,4-dihydroquinoxalin-2(1H)-one

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: Y.233, P.241, F.242, E.247, Q.252, V.253, F.254, R.256 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.233, A:E.247, A:Q.252, A:F.254, A:R.256

1 x 8UB: 3-(2-thiophen-2-ylethenyl)-1~{H}-quinoxalin-2-one(Non-covalent)

8UB.2: 8 residues within 4Å: Chain A: F.49, V.52, A.65, K.67, L.120, E.121, L.174, I.185 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.49, A:V.52, A:A.65, A:L.174 Hydrogen bonds: A:D.186

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Siefker, C. et al., A crystallographic fragment study with human Pim-1 kinase. to be published

Release Date

2018-05-16

Peptides

Serine/threonine-protein kinase pim-1: A
Pimtide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine/threonine-protein kinase pim-1

Pimtide

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