SMTL ID : 3cy3.1

Crystal structure of human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and the JNK inhibitor V

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

hetero-1-1-mer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: E.90, L.94, I.105, L.121, I.186, D.187, F.188 Ligands: JN5.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.68, A:E.90, A:D.187, A:F.188

1 x JN5: (2S)-1,3-benzothiazol-2-yl{2-[(2-pyridin-3-ylethyl)amino]pyrimidin-4-yl}ethanenitrile(Non-covalent)

JN5.2: 14 residues within 4Å: Chain A: L.45, F.50, V.53, A.66, K.68, I.105, E.122, V.127, D.129, N.173, L.175, I.186, D.187 Ligands: EDO.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.53, A:A.66, A:I.105, A:I.105, A:V.127, A:L.175, A:L.175, A:I.186 Water bridges: A:D.129 pi-Stacking: A:F.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Filippakopoulos, P. et al., Proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and the JNK inhibitor V. To be Published

Release Date

2008-07-15

Peptides

Serine/threonine-protein kinase pim-1: A
Pimtide peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine/threonine-protein kinase pim-1

Pimtide peptide

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