SMTL ID : 4gw8.1

Human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and Leucettine L41

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 3RA: 5-(1,3-benzodioxol-5-ylmethyl)-2-(phenylamino)-4H-imidazol-4-one(Non-covalent)

3RA.1: 14 residues within 4Å: Chain A: L.45, G.46, F.50, V.53, A.66, I.105, L.121, E.122, R.123, P.124, V.127, L.175, I.186, D.187 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.45, A:F.50, A:V.53, A:A.66, A:R.123, A:L.175 Hydrogen bonds: A:D.187 Water bridges: A:D.187, A:D.187

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: D.109, W.110, F.111 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tahtouh, T. et al., Selectivity, cocrystal structures, and neuroprotective properties of leucettines, a family of protein kinase inhibitors derived from the marine sponge alkaloid leucettamine B. J.Med.Chem. (2012)

Release Date

2012-10-03

Peptides

Serine/threonine-protein kinase pim-1: A
Consensus peptide (Pimtide): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine/threonine-protein kinase pim-1

Consensus peptide (Pimtide)

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