- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.67 Å
- Oligo State
- homo-tetramer
- Ligands
- 7 x GOL: GLYCEROL(Non-functional Binders)
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 4 residues within 4Å:- Chain A: S.112, I.113
- Chain B: G.417, E.418
6 PLIP interactions:3 interactions with chain B, 3 interactions with chain A- Water bridges: B:E.418, B:E.418, B:E.418, A:E.114, A:R.166
- Hydrogen bonds: A:I.113
SO4.7: 5 residues within 4Å:- Chain A: G.417, E.418
- Chain B: S.112, I.113, E.114
5 PLIP interactions:3 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:N.111, B:I.113
- Water bridges: B:R.166, A:G.417, A:E.418
SO4.9: 6 residues within 4Å:- Chain C: N.111, S.112, I.113, E.114
- Chain D: G.417, E.418
5 PLIP interactions:2 interactions with chain C, 3 interactions with chain D- Hydrogen bonds: C:I.113
- Water bridges: C:R.166, D:E.418, D:E.418, D:E.418
SO4.10: 4 residues within 4Å:- Chain C: G.417, E.418
- Chain D: S.112, I.113
6 PLIP interactions:2 interactions with chain C, 4 interactions with chain D- Water bridges: C:E.418, C:E.418, D:E.114, D:R.166
- Hydrogen bonds: D:N.111, D:I.113
- 2 x ACY: ACETIC ACID(Non-functional Binders)
ACY.4: 6 residues within 4Å:- Chain A: H.26, Y.27, D.362, R.366
- Chain D: A.434, M.435
9 PLIP interactions:2 interactions with chain D, 7 interactions with chain A- Hydrophobic interactions: D:A.434, D:M.435
- Hydrogen bonds: A:R.366
- Water bridges: A:H.26, A:H.26, A:H.26, A:Q.316, A:Q.316
- Salt bridges: A:H.26
ACY.13: 6 residues within 4Å:- Chain A: A.434, M.435
- Chain D: H.26, Y.27, D.362, R.366
7 PLIP interactions:2 interactions with chain A, 5 interactions with chain D- Water bridges: A:A.434, A:M.435, D:Q.316, D:R.366, D:R.366
- Hydrophobic interactions: D:D.362
- Salt bridges: D:R.366
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lee, M. et al., Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography. Biochemistry (2017)
- Release Date
- 2017-11-01
- Peptides
- Xylose isomerase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.67 Å
- Oligo State
- homo-tetramer
- Ligands
- 7 x GOL: GLYCEROL(Non-functional Binders)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 2 x ACY: ACETIC ACID(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lee, M. et al., Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography. Biochemistry (2017)
- Release Date
- 2017-11-01
- Peptides
- Xylose isomerase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D