- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.36 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x LU8: 4-methyl-3-[4-(1-methylpiperidin-4-yl)phenyl]-5-(3,4,5-trimethoxyphenyl)pyridine(Non-covalent)
- 11 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.2: 9 residues within 4Å:- Chain A: H.61, E.62, N.63, I.64, L.65, G.66, H.86, H.88, C.153
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:H.61, A:I.64, A:G.66, A:H.88
EDO.3: 6 residues within 4Å:- Chain A: F.233, D.235, V.236, Q.255, R.256, N.258
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:N.258
- Water bridges: A:F.233, A:Q.255, A:Q.255, A:N.258, A:N.258
EDO.4: 2 residues within 4Å:- Chain A: R.247, V.252
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.247, A:R.247
EDO.5: 6 residues within 4Å:- Chain A: R.182, F.233, Y.234, V.237, P.238, N.239
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.182, A:R.182, A:P.238
EDO.13: 7 residues within 4Å:- Chain A: V.57, M.58, L.59, R.60, H.120, G.130, K.131
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.60, A:R.60
- Water bridges: A:G.130, A:G.130
EDO.14: 4 residues within 4Å:- Chain A: N.223, I.225, R.262, S.265
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:N.223, A:S.265
- Water bridges: A:S.222, A:R.262
EDO.15: 3 residues within 4Å:- Chain A: G.19, R.20, Y.21
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.20, A:Y.21
EDO.16: 3 residues within 4Å:- Chain A: R.218, K.230, Y.234
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.218, A:R.218
- Water bridges: A:Y.234, A:Y.234
EDO.19: 7 residues within 4Å:- Chain B: F.233, D.235, V.236, Q.255, R.256, P.257, N.258
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:N.258, B:N.258
- Water bridges: B:F.233, B:N.258
EDO.26: 9 residues within 4Å:- Chain B: H.61, E.62, I.64, L.65, G.66, H.86, H.88, K.147, C.153
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:H.61, B:G.66, B:H.86, B:H.88
- Water bridges: B:H.61, B:K.147
EDO.27: 3 residues within 4Å:- Chain B: V.221, G.224, V.226
2 PLIP interactions:2 interactions with chain B- Water bridges: B:V.226, B:V.226
- 2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)
- 5 x XHJ: (3S)-pyrazolidin-3-amine(Non-covalent)
XHJ.9: 4 residues within 4Å:- Chain A: R.109, L.112, S.113, Q.151
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Q.151
- Water bridges: A:E.62, A:Q.151
XHJ.21: 4 residues within 4Å:- Chain B: R.137, V.172, V.195, Y.201
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:R.137, B:R.137, B:V.172, B:Y.201, B:Y.201, B:Y.201
XHJ.22: 4 residues within 4Å:- Chain B: E.14, V.16, Y.87
- Ligands: LU8.17
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:Y.87
- Water bridges: B:E.14, B:Y.87
XHJ.23: 7 residues within 4Å:- Chain B: M.90, Y.96, S.106, V.146, K.147, K.148, G.150
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:Y.96
- Hydrogen bonds: B:S.106, B:K.148
- Water bridges: B:S.106, B:R.109, B:R.109
XHJ.24: 7 residues within 4Å:- Chain A: S.74
- Chain B: Y.54, L.59, R.60, L.65, G.66, F.67
8 PLIP interactions:6 interactions with chain B, 2 interactions with chain A- Hydrophobic interactions: B:Y.54, B:R.60
- Hydrogen bonds: B:R.60, B:R.60, B:L.65, B:F.67, A:S.74, A:S.74
- 5 x SO4: SULFATE ION(Non-functional Binders)
SO4.10: 2 residues within 4Å:- Chain A: P.260, N.261
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.261
- Water bridges: A:N.261, A:R.262
SO4.11: 4 residues within 4Å:- Chain A: R.182, N.239, D.240, P.241
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:D.240, A:D.240
- Water bridges: A:R.182, A:R.182, A:N.239
- Salt bridges: A:R.182
SO4.12: 3 residues within 4Å:- Chain A: H.88, K.147, K.148
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:K.148
- Water bridges: A:E.89, A:N.149
- Salt bridges: A:H.88
SO4.18: 3 residues within 4Å:- Chain B: H.88, K.147, K.148
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:K.148
- Water bridges: B:E.89, B:V.146, B:N.149
- Salt bridges: B:H.88
SO4.25: 3 residues within 4Å:- Chain B: G.179, T.180, K.181
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:G.179, B:K.181
- Water bridges: B:K.140, B:K.181, B:D.240
- Salt bridges: B:K.181
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Williams, E.P. et al., XChem group deposition. To Be Published
- Release Date
- 2021-06-23
- Peptides
- Activin receptor type-1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
SMTL ID : 5s7l.1
XChem group deposition -- Crystal Structure of human ACVR1 in complex with FM010943a
Activin receptor type-1
Related Entries With Identical Sequence
3mtf.1 | 3mtf.2 | 3oom.1 | 3q4u.1 | 3q4u.2 | 3q4u.3 | 4bgg.1 | 4bgg.2 | 4bgg.3 | 4bgg.4 | 5oxg.1 | 5oxg.2 | 5oxg.3 | 5oxg.4 | 5oy6.1 | 5oy6.2 | 5oy6.3 | 5oy6.4 | 5s75.1 | 5s75.2 | 5s76.1 | 5s76.2 | 5s77.1 | 5s77.2 | 5s78.1 | 5s78.2 | 5s79.1 | 5s79.2 | 5s7a.1 | 5s7a.2 more...less...5s7b.1 | 5s7b.2 | 5s7c.1 | 5s7c.2 | 5s7d.1 | 5s7d.2 | 5s7e.1 | 5s7e.2 | 5s7f.1 | 5s7f.2 | 5s7g.1 | 5s7g.2 | 5s7h.1 | 5s7h.2 | 5s7i.1 | 5s7i.2 | 5s7j.1 | 5s7j.2 | 5s7k.1 | 5s7m.1 | 5s7n.1 | 5s7o.1 | 5s7o.2 | 5s7p.1 | 5s7p.2 | 5s7q.1 | 5s7r.1 | 5s7r.2 | 5s7s.1 | 5s7s.2 | 5s7t.1 | 5s7u.1 | 5s7v.1 | 5s7v.2 | 5s7w.1 | 5s7x.1 | 5s7x.2 | 5s7y.1 | 5s7z.1 | 5s7z.2 | 5s80.1 | 5s80.2 | 5s81.1 | 5s82.1 | 5s83.1 | 5s84.1 | 5s85.1 | 5s86.1 | 5s87.1 | 5s87.2 | 5s88.1 | 5s88.2 | 5s89.1 | 5s89.2 | 5s8a.1 | 5s8b.1 | 5s9k.1 | 6gi6.1 | 6gin.1 | 6gip.1 | 6srh.1 | 6srh.2 | 6szm.1 | 6szm.2 | 6t6d.1 | 6t6d.2 | 6t6d.3 | 6t6d.4 | 6t8n.1 | 6t8n.2 | 6tn8.1 | 6z36.1 | 6z36.2 | 6zgc.1 | 6zgc.2 | 6zgc.3 | 6zgc.4 | 7a21.1 | 7a21.2 | 7nns.1 | 8c7w.1 | 8c7z.1 | 8r7g.1 | 8r7g.2 | 8r7g.3 | 8r7g.4