- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.55 Å
- Oligo State
- monomer
- Ligands
- 1 x 7DL: ((15S)-18-CHLORO- 15-(((2E)-3-(5-CHLORO-2-(1H-TETRAZOL-1-YL)PHENYL)-2- PROPENOYL)AMINO)-17,19-DIAZATRICYCLO[14.2.1.0~2,7~]NONADECA-1(18),2,4,6,16(19)-PENTAEN-5-YL)CARBAMATE(Non-covalent)
- 1 x SO4: SULFATE ION(Non-functional Binders)
- 15 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.3: 5 residues within 4Å:- Chain A: K.185
- Ligands: 7DL.1, EDO.6, EDO.7, EDO.10
1 PLIP interactions:1 interactions with chain A- Water bridges: A:K.185
EDO.4: 5 residues within 4Å:- Chain A: N.36, T.102, V.103, G.104, Y.105
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.36, A:Y.105
- Water bridges: A:Y.105
EDO.5: 9 residues within 4Å:- Chain A: V.8, R.9, G.10, E.11, W.12, P.13, I.61, L.62, L.145
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.10, A:W.12, A:W.12, A:I.61
EDO.6: 8 residues within 4Å:- Chain A: L.137, K.185, G.209, E.210, G.211
- Ligands: 7DL.1, EDO.3, EDO.7
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:G.209, A:G.211
EDO.7: 7 residues within 4Å:- Chain A: E.89, W.208, G.209, E.210
- Ligands: 7DL.1, EDO.3, EDO.6
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:E.210
- Water bridges: A:G.209, A:G.209, A:E.210
EDO.8: 6 residues within 4Å:- Chain A: S.90, G.91, Y.92, T.168, K.170, M.171
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:S.90, A:Y.92, A:T.168
EDO.9: 3 residues within 4Å:- Chain A: R.26, Y.134
- Ligands: 7DL.1
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.26, A:R.26, A:Y.134
EDO.10: 2 residues within 4Å:- Ligands: 7DL.1, EDO.3
No protein-ligand interaction detected (PLIP)EDO.11: 9 residues within 4Å:- Chain A: V.153, E.157, R.161, G.175, Y.176, R.177, E.216, R.217, P.218
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:E.157, A:R.161, A:R.161, A:Y.176, A:E.216
- Water bridges: A:R.217
EDO.12: 6 residues within 4Å:- Chain A: T.154, N.155, H.169, M.171, I.172, N.223
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.155, A:H.169
- Water bridges: A:V.153
EDO.13: 5 residues within 4Å:- Chain A: E.11, W.12, W.128, K.147, W.200
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.147
EDO.14: 6 residues within 4Å:- Chain A: H.19, Q.25, R.26, I.67, K.68, E.69
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:E.69
- Water bridges: A:Y.58, A:Q.64, A:I.67
EDO.15: 7 residues within 4Å:- Chain A: I.34, G.35, W.38, L.114, I.231, L.232, T.235
2 PLIP interactions:2 interactions with chain A- Water bridges: A:N.36, A:N.36
EDO.16: 4 residues within 4Å:- Chain A: K.166, I.167, T.168, H.169
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:K.166, A:H.169
- Water bridges: A:K.170
EDO.17: 3 residues within 4Å:- Chain A: R.9, L.62, N.63
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.9, A:R.9
- Water bridges: A:R.9, A:N.63
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Corte, J.R. et al., Structure-Based Design of Macrocyclic Factor XIa Inhibitors: Discovery of the Macrocyclic Amide Linker. J. Med. Chem. (2017)
- Release Date
- 2017-03-01
- Peptides
- Coagulation factor XI: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.55 Å
- Oligo State
- monomer
- Ligands
- 1 x 7DL: ((15S)-18-CHLORO- 15-(((2E)-3-(5-CHLORO-2-(1H-TETRAZOL-1-YL)PHENYL)-2- PROPENOYL)AMINO)-17,19-DIAZATRICYCLO[14.2.1.0~2,7~]NONADECA-1(18),2,4,6,16(19)-PENTAEN-5-YL)CARBAMATE(Non-covalent)
- 1 x SO4: SULFATE ION(Non-functional Binders)
- 15 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Corte, J.R. et al., Structure-Based Design of Macrocyclic Factor XIa Inhibitors: Discovery of the Macrocyclic Amide Linker. J. Med. Chem. (2017)
- Release Date
- 2017-03-01
- Peptides
- Coagulation factor XI: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A