SMTL ID : 5uvi.1

Serial Millisecond Crystallography of Membrane and Soluble Protein Micro-crystals using Synchrotron Radiation

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

1 x ZMA: 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol(Non-covalent)

ZMA.1: 10 residues within 4Å: Chain A: F.193, E.194, M.202, W.367, L.370, H.371, N.374, H.385, L.388, M.391 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:W.367, A:L.370, A:L.388 Hydrogen bonds: A:N.374, A:N.374 Salt bridges: A:E.194 pi-Stacking: A:F.193, A:F.193

3 x CLR: CHOLESTEROL(Non-covalent)

CLR.2: 4 residues within 4Å: Chain A: C.375, F.376, F.379, C.380 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.376, A:F.376, A:F.379 CLR.3: 8 residues within 4Å: Chain A: P.369, I.372, I.373, F.376, C.383, S.384, A.386, L.390 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:P.369, A:I.372, A:I.373, A:F.376, A:A.386 Hydrogen bonds: A:S.384 CLR.4: 5 residues within 4Å: Chain A: L.83, A.97, A.98, G.101, I.105 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.83, A:A.98, A:I.105 Hydrogen bonds: A:A.98

2 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLC.5: 3 residues within 4Å: Chain A: Y.68, I.150, W.154 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:W.154, A:W.154 OLC.6: 5 residues within 4Å: Chain A: G.30, S.31, Y.34, V.37, Y.392 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.34, A:V.37, A:Y.392 Hydrogen bonds: A:S.31

1 x OLA: OLEIC ACID(Non-covalent)

OLA.7: 2 residues within 4Å: Chain A: S.32, T.36 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martin-Garcia, J.M. et al., Serial millisecond crystallography of membrane and soluble protein microcrystals using synchrotron radiation. IUCrJ (2017)

Release Date

2017-05-24

Peptides

Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a

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