SMTL ID : 7rm5.1

MicroED structure of the human adenosine receptor at 2.8A

Coordinates

PDB Format Compare

Method

ELECTRON CRYSTALLOGRAPHY 2.79 Å

Oligo State

monomer

Ligands

1 x ZMA: 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol(Non-covalent)

ZMA.1: 13 residues within 4Å: Chain A: L.110, F.193, E.194, M.202, N.206, W.367, L.370, H.371, N.374, H.385, L.388, M.391, I.395 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.110, A:W.367, A:L.370, A:L.388 Hydrogen bonds: A:N.374, A:N.374 Water bridges: A:Y.392 Salt bridges: A:E.194 pi-Stacking: A:F.193, A:F.193

4 x CLR: CHOLESTEROL(Non-covalent)

CLR.2: 6 residues within 4Å: Chain A: P.369, I.372, I.373, F.376, S.384, L.390 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:P.369, A:I.372, A:I.372, A:I.372, A:I.373, A:F.376, A:F.376 Hydrogen bonds: A:S.384, A:S.384 CLR.3: 7 residues within 4Å: Chain A: L.212, L.368, C.375, F.376, F.379, C.380 Ligands: CLR.5 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.212, A:L.368, A:F.376, A:F.376, A:F.376, A:F.379, A:F.379 CLR.4: 7 residues within 4Å: Chain A: L.83, F.87, F.95, A.97, A.98, G.101, I.105 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.83, A:F.95, A:A.97, A:I.105 Hydrogen bonds: A:A.98 CLR.5: 4 residues within 4Å: Chain A: Y.204, F.208, F.379 Ligands: CLR.3 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.208, A:F.379, A:F.379, A:F.379, A:F.379 Hydrogen bonds: A:F.379

1 x NA: SODIUM ION(Non-functional Binders)

NA.6: 2 residues within 4Å: Chain A: D.77, S.116 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.77, A:S.116 Water bridges: A:N.401

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martynowycz, M.W. et al., MicroED structure of the human adenosine receptor determined from a single nanocrystal in LCP. Proc.Natl.Acad.Sci.USA (2021)

Release Date

2021-09-08

Peptides

Adenosine receptor A2a/Soluble cytochrome b562 chimera: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Adenosine receptor A2a/Soluble cytochrome b562 chimera

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