SMTL ID : 5v7c.1

Crystal structure of LARP1-unique domain DM15 bound 5'TOP RNA sequence

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.59 Å

Oligo State

monomer

Ligands

1 x C- U- U- U- U- C- C- G: RNA (5'-R(*CP*UP*UP*UP*UP*CP*CP*G)-3')(Non-covalent)

C-U-U-U-U-C-C-G.1: 14 residues within 4Å: Chain A: Q.12, H.13, H.16, K.31, N.52, T.53, R.56, F.60, R.63, Y.88, E.91, R.95, Y.99, Y.127 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lahr, R.M. et al., La-related protein 1 (LARP1) binds the mRNA cap, blocking eIF4F assembly on TOP mRNAs. Elife (2017)

Release Date

2017-04-19

Peptides

La-related protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

La-related protein 1

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