SMTL ID : 5v87.1 (1 other biounit)

Crystal structure of LARP1-unique domain DM15 bound to m7GpppC

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

monomer

Ligands

1 x MGT: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

MGT.1: 9 residues within 4Å: Chain A: S.98, Y.99, E.102, E.130, K.131, W.133, A.134, F.135, Y.138 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:S.98, A:S.98, A:Y.99, A:E.130, A:Y.138, A:Y.138 Water bridges: A:K.131 Salt bridges: A:E.102 pi-Stacking: A:Y.99, A:Y.138, A:Y.138 pi-Cation interactions: A:Y.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lahr, R.M. et al., La-related protein 1 (LARP1) binds the mRNA cap, blocking eIF4F assembly on TOP mRNAs. Elife (2017)

Release Date

2017-04-19

Peptides

La-related protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

La-related protein 1

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