SMTL ID : 5v83.1

Structure of DCN1 bound to NAcM-HIT

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x 8Z7: N-(1-benzylpiperidin-4-yl)-N'-[3-(trifluoromethyl)phenyl]urea(Non-covalent)

8Z7.1: 16 residues within 4Å: Chain A: I.211, F.214, P.222, A.223, V.227, I.230, A.231, A.236, T.238, Q.239, E.241, F.242, F.289, A.305, Y.306, L.309 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:A.223, A:A.231, A:A.236, A:F.242, A:F.242, A:F.289, A:F.289, A:A.305, A:Y.306, A:Y.306, A:L.309 Hydrogen bonds: A:Q.239, A:Q.239 Halogen bonds: A:V.227

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scott, D.C. et al., Blocking an N-terminal acetylation-dependent protein interaction inhibits an E3 ligase. Nat. Chem. Biol. (2017)

Release Date

2017-05-24

Peptides

Lysozyme,DCN1-like protein 1 chimera: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lysozyme,DCN1-like protein 1 chimera

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