SMTL ID : 5vft.1

Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-2-2-2-2-2-2-2-2-2-2-2-2-2-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain I: V.59, H.90, H.92, S.100, D.103 1 PLIP interactions: 1 interactions with chain I Metal complexes: I:H.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, Y. et al., Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome. Nat Commun (2018)

Release Date

2018-07-18

Peptides

26S proteasome non-ATPase regulatory subunit 1: A
26S proteasome non-ATPase regulatory subunit 3: B
26S proteasome non-ATPase regulatory subunit 12: C
26S proteasome non-ATPase regulatory subunit 11: D
26S proteasome non-ATPase regulatory subunit 6: E
26S proteasome non-ATPase regulatory subunit 7: F
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 13, isoform CRA_a: G
26S proteasome non-ATPase regulatory subunit 4: H
26S proteasome non-ATPase regulatory subunit 14: I
26S proteasome non-ATPase regulatory subunit 8: J
sem1: K
26S proteasome regulatory subunit 7: L
26S proteasome regulatory subunit 4: M
26S proteasome regulatory subunit 8: N
26S proteasome regulatory subunit 6B: O
26S proteasome regulatory subunit 10B: P
26S proteasome regulatory subunit 6A: Q
Proteasome subunit alpha type-6: R5
Proteasome subunit alpha type-2: S6
Proteasome subunit alpha type-4: T7
Proteasome subunit alpha type-7: U8
Proteasome subunit alpha type-5: V9
Proteasome subunit alpha type-1: Wa
Proteasome subunit alpha type-3: Xb
Proteasome subunit beta type-6: Yc
Proteasome subunit beta type-7: Zd
Proteasome subunit beta type-3: 0e
Proteasome subunit beta type-2: 1f
Proteasome subunit beta type-5: 2g
Proteasome subunit beta type-1: 3h
Proteasome subunit beta type-4: 4i
26S proteasome non-ATPase regulatory subunit 2: j

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
U

B
V

C
W

D
X

E
Y

F
Z

G
a

H
b

I
c

J
d

K
e

L
A

M
B

N
C

O
D

P
E

Q
F

R
G

5
g

S
H

6
h

T
I

7
i

U
J

8
j

V
K

9
k

W
L

a
l

X
M

b
m

Y
N

c
n

Z
O

d
o

0
P

e
p

1
Q

f
q

2
R

g
r

3
S

h
s

4
T

i
t

j
f

26S proteasome non-ATPase regulatory subunit 1

26S proteasome non-ATPase regulatory subunit 3

26S proteasome non-ATPase regulatory subunit 12

26S proteasome non-ATPase regulatory subunit 11

26S proteasome non-ATPase regulatory subunit 6

26S proteasome non-ATPase regulatory subunit 7

Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 13, isoform CRA_a

26S proteasome non-ATPase regulatory subunit 4

26S proteasome non-ATPase regulatory subunit 14

26S proteasome non-ATPase regulatory subunit 8

sem1

26S proteasome regulatory subunit 7

26S proteasome regulatory subunit 4

26S proteasome regulatory subunit 8

26S proteasome regulatory subunit 6B

26S proteasome regulatory subunit 10B

26S proteasome regulatory subunit 6A

Proteasome subunit alpha type-6

Proteasome subunit alpha type-2

Proteasome subunit alpha type-4

Proteasome subunit alpha type-7

Proteasome subunit alpha type-5

Proteasome subunit alpha type-1

Proteasome subunit alpha type-3

Proteasome subunit beta type-6

Proteasome subunit beta type-7

Proteasome subunit beta type-3

Proteasome subunit beta type-2

Proteasome subunit beta type-5

Proteasome subunit beta type-1

Proteasome subunit beta type-4

26S proteasome non-ATPase regulatory subunit 2

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