- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x MN: MANGANESE (II) ION(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 6 residues within 4Å:- Chain A: I.50, E.51, T.52, N.53, K.54, S.195
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:E.51, A:E.51, A:T.52, A:N.53, A:N.53, A:K.54
SO4.7: 6 residues within 4Å:- Chain B: I.50, E.51, T.52, N.53, K.54, S.195
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:E.51, B:E.51, B:T.52, B:N.53, B:N.53, B:K.54
SO4.11: 6 residues within 4Å:- Chain C: I.50, E.51, T.52, N.53, K.54, S.195
6 PLIP interactions:6 interactions with chain C- Hydrogen bonds: C:E.51, C:E.51, C:T.52, C:N.53, C:N.53, C:K.54
SO4.15: 6 residues within 4Å:- Chain D: I.50, E.51, T.52, N.53, K.54, S.195
6 PLIP interactions:6 interactions with chain D- Hydrogen bonds: D:E.51, D:E.51, D:T.52, D:N.53, D:N.53, D:K.54
- 4 x R07: 1-[(11S)-6,11-dihydrodibenzo[b,e]thiepin-11-yl]-5-hydroxy-3-[(2R)-1,1,1-trifluoropropan-2-yl]-2,3-dihydro-1H-pyrido[2,1-f][1,2,4]triazine-4,6-dione(Non-covalent)
R07.4: 14 residues within 4Å:- Chain A: A.40, Y.44, A.57, I.58, H.61, E.81, L.107, D.109, E.120, I.121, Y.131, K.135
- Ligands: MN.1, MN.2
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:Y.44, A:Y.44, A:I.58, A:I.58, A:H.61
- Hydrogen bonds: A:K.135
- pi-Stacking: A:H.61
- Halogen bonds: A:L.107
R07.8: 14 residues within 4Å:- Chain B: A.40, Y.44, A.57, I.58, H.61, E.81, L.107, D.109, E.120, I.121, Y.131, K.135
- Ligands: MN.5, MN.6
8 PLIP interactions:8 interactions with chain B- Hydrophobic interactions: B:Y.44, B:Y.44, B:I.58, B:I.58, B:H.61
- Hydrogen bonds: B:K.135
- pi-Stacking: B:H.61
- Halogen bonds: B:L.107
R07.12: 14 residues within 4Å:- Chain C: A.40, Y.44, A.57, I.58, H.61, E.81, L.107, D.109, E.120, I.121, Y.131, K.135
- Ligands: MN.9, MN.10
8 PLIP interactions:8 interactions with chain C- Hydrophobic interactions: C:Y.44, C:Y.44, C:I.58, C:I.58, C:H.61
- Hydrogen bonds: C:K.135
- pi-Stacking: C:H.61
- Halogen bonds: C:L.107
R07.16: 14 residues within 4Å:- Chain D: A.40, Y.44, A.57, I.58, H.61, E.81, L.107, D.109, E.120, I.121, Y.131, K.135
- Ligands: MN.13, MN.14
10 PLIP interactions:10 interactions with chain D- Hydrophobic interactions: D:Y.44, D:Y.44, D:I.58, D:I.58, D:H.61
- Hydrogen bonds: D:E.81, D:D.109, D:K.135
- pi-Stacking: D:H.61
- Halogen bonds: D:L.107
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jones, J.C. et al., Identification of the I38T PA Substitution as a Resistance Marker for Next-Generation Influenza Virus Endonuclease Inhibitors. MBio (2018)
- Release Date
- 2018-04-11
- Peptides
- Polymerase acidic protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x MN: MANGANESE (II) ION(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 4 x R07: 1-[(11S)-6,11-dihydrodibenzo[b,e]thiepin-11-yl]-5-hydroxy-3-[(2R)-1,1,1-trifluoropropan-2-yl]-2,3-dihydro-1H-pyrido[2,1-f][1,2,4]triazine-4,6-dione(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jones, J.C. et al., Identification of the I38T PA Substitution as a Resistance Marker for Next-Generation Influenza Virus Endonuclease Inhibitors. MBio (2018)
- Release Date
- 2018-04-11
- Peptides
- Polymerase acidic protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A