- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 8 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.2: 6 residues within 4Å:- Chain A: L.51, Q.53, Y.228, G.313, Y.314
- Ligands: FAD.1
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:Q.53, A:Y.228, A:Y.314
- Hydrogen bonds: A:G.313
MPD.3: 6 residues within 4Å:- Chain A: P.41, D.46, R.142, K.204, Y.279
- Ligands: MPD.4
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:P.41, A:D.46, A:R.142
MPD.4: 6 residues within 4Å:- Chain A: P.41, F.42, V.47, Y.279, T.280
- Ligands: MPD.3
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:F.42, A:V.47, A:Y.279
MPD.5: 2 residues within 4Å:- Chain A: F.39, F.159
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:F.39
MPD.8: 9 residues within 4Å:- Chain B: L.51, Q.53, I.215, H.217, I.223, Y.224, G.313, Y.314
- Ligands: FAD.7
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:I.215, B:I.223, B:Y.314
MPD.9: 3 residues within 4Å:- Chain B: R.38, F.42, E.249
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:R.38
MPD.10: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MPD.11: 5 residues within 4Å:- Chain B: E.140, R.142, K.143, Q.146, Q.234
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:R.142
- 1 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yasukawa, K. et al., Tailoring D-amino acid oxidase from the pid kidney to R-stereoselective amine oxidase and its use in the deracemization of 4-chlorobenzhydrylamine. To Be Published
- Release Date
- 2018-01-17
- Peptides
- D-amino-acid oxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 8 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- 1 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yasukawa, K. et al., Tailoring D-amino acid oxidase from the pid kidney to R-stereoselective amine oxidase and its use in the deracemization of 4-chlorobenzhydrylamine. To Be Published
- Release Date
- 2018-01-17
- Peptides
- D-amino-acid oxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B