- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 5 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.2: 6 residues within 4Å:- Chain A: I.215, Y.228, G.240, F.242, G.313
- Ligands: FAD.1
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:I.215, A:Y.228, A:Y.228, A:F.242
- Hydrogen bonds: A:G.313
MPD.5: 3 residues within 4Å:- Chain B: N.251, I.253, H.256
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:I.253
MPD.6: 5 residues within 4Å:- Chain B: P.41, D.46, V.47, K.204, Y.279
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:Y.279, B:Y.279
MPD.7: 5 residues within 4Å:- Chain B: P.41, F.42, V.47, Y.279, T.280
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:V.47, B:Y.279
MPD.8: 3 residues within 4Å:- Chain B: V.184, W.185, W.247
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:W.247
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 3 residues within 4Å:- Chain A: T.118, P.119, R.120
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:T.118, A:R.120
- Salt bridges: A:R.120
SO4.9: 4 residues within 4Å:- Chain A: L.112
- Chain B: T.118, P.119, R.120
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:T.118, B:R.120
- Salt bridges: B:R.120
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yasukawa, K. et al., Tailoring D-amino acid oxidase from the pid kidney to R-stereoselective amine oxidase and its use in the deracemization of 4-chlorobenzhydrylamine. To Be Published
- Release Date
- 2018-01-17
- Peptides
- D-amino-acid oxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 5 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yasukawa, K. et al., Tailoring D-amino acid oxidase from the pid kidney to R-stereoselective amine oxidase and its use in the deracemization of 4-chlorobenzhydrylamine. To Be Published
- Release Date
- 2018-01-17
- Peptides
- D-amino-acid oxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
F