SMTL ID : 5xds.1

Crystal structure of Mycobacterium tuberculosis HisB bound with an inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-24-mer

Ligands

48 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 5 residues within 4Å: Chain A: H.79, E.83, H.158 Chain P: H.183 Ligands: 83O.4 5 PLIP interactions: 3 interactions with chain A, 1 interactions with chain P, 1 Ligand-Water interactions Metal complexes: A:H.79, A:E.83, A:H.158, P:H.183, H2O.2 MN.2: 5 residues within 4Å: Chain A: H.53, H.182, E.186 Chain O: H.80 Ligands: 83O.60 5 PLIP interactions: 3 interactions with chain A, 1 interactions with chain O, 1 Ligand-Water interactions Metal complexes: A:H.53, A:H.182, A:E.186, O:H.80, H2O.1 MN.5: 5 residues within 4Å: Chain B: H.79, E.83, H.158 Chain O: H.183 Ligands: 83O.8 5 PLIP interactions: 3 interactions with chain B, 1 interactions with chain O, 1 Ligand-Water interactions Metal complexes: B:H.79, B:E.83, B:H.158, O:H.183, H2O.9 MN.6: 5 residues within 4Å: Chain B: H.53, H.182, E.186 Chain P: H.80 Ligands: 83O.64 5 PLIP interactions: 3 interactions with chain B, 1 interactions with chain P, 1 Ligand-Water interactions Metal complexes: B:H.53, B:H.182, B:E.186, P:H.80, H2O.9 MN.9: 5 residues within 4Å: Chain C: H.79, E.83, H.158 Chain M: H.183 Ligands: 83O.12 5 PLIP interactions: 3 interactions with chain C, 1 interactions with chain M, 1 Ligand-Water interactions Metal complexes: C:H.79, C:E.83, C:H.158, M:H.183, H2O.17 MN.10: 5 residues within 4Å: Chain C: H.53, H.182, E.186 Chain N: H.80 Ligands: 83O.56 5 PLIP interactions: 3 interactions with chain C, 1 interactions with chain N, 1 Ligand-Water interactions Metal complexes: C:H.53, C:H.182, C:E.186, N:H.80, H2O.16 MN.13: 5 residues within 4Å: Chain D: H.79, E.83, H.158 Chain N: H.183 Ligands: 83O.16 5 PLIP interactions: 3 interactions with chain D, 1 interactions with chain N, 1 Ligand-Water interactions Metal complexes: D:H.79, D:E.83, D:H.158, N:H.183, H2O.24 MN.14: 5 residues within 4Å: Chain D: H.53, H.182, E.186 Chain M: H.80 Ligands: 83O.52 5 PLIP interactions: 1 interactions with chain M, 3 interactions with chain D, 1 Ligand-Water interactions Metal complexes: M:H.80, D:H.53, D:H.182, D:E.186, H2O.24 MN.17: 5 residues within 4Å: Chain E: H.79, E.83, H.158 Chain V: H.183 Ligands: 83O.20 5 PLIP interactions: 3 interactions with chain E, 1 interactions with chain V, 1 Ligand-Water interactions Metal complexes: E:H.79, E:E.83, E:H.158, V:H.183, H2O.32 MN.18: 5 residues within 4Å: Chain E: H.53, H.182, E.186 Chain U: H.80 Ligands: 83O.84 5 PLIP interactions: 3 interactions with chain E, 1 interactions with chain U, 1 Ligand-Water interactions Metal complexes: E:H.53, E:H.182, E:E.186, U:H.80, H2O.31 MN.21: 5 residues within 4Å: Chain F: H.79, E.83, H.158 Chain U: H.183 Ligands: 83O.24 5 PLIP interactions: 3 interactions with chain F, 1 interactions with chain U, 1 Ligand-Water interactions Metal complexes: F:H.79, F:E.83, F:H.158, U:H.183, H2O.39 MN.22: 5 residues within 4Å: Chain F: H.53, H.182, E.186 Chain V: H.80 Ligands: 83O.88 5 PLIP interactions: 3 interactions with chain F, 1 interactions with chain V, 1 Ligand-Water interactions Metal complexes: F:H.53, F:H.182, F:E.186, V:H.80, H2O.39 MN.25: 5 residues within 4Å: Chain G: H.79, E.83, H.158 Chain W: H.183 Ligands: 83O.28 5 PLIP interactions: 3 interactions with chain G, 1 interactions with chain W, 1 Ligand-Water interactions Metal complexes: G:H.79, G:E.83, G:H.158, W:H.183, H2O.47 MN.26: 5 residues within 4Å: Chain G: H.53, H.182, E.186 Chain X: H.80 Ligands: 83O.96 5 PLIP interactions: 3 interactions with chain G, 1 interactions with chain X, 1 Ligand-Water interactions Metal complexes: G:H.53, G:H.182, G:E.186, X:H.80, H2O.46 MN.29: 5 residues within 4Å: Chain H: H.79, E.83, H.158 Chain X: H.183 Ligands: 83O.32 5 PLIP interactions: 1 interactions with chain X, 3 interactions with chain H, 1 Ligand-Water interactions Metal complexes: X:H.183, H:H.79, H:E.83, H:H.158, H2O.54 MN.30: 5 residues within 4Å: Chain H: H.53, H.182, E.186 Chain W: H.80 Ligands: 83O.92 5 PLIP interactions: 3 interactions with chain H, 1 interactions with chain W, 1 Ligand-Water interactions Metal complexes: H:H.53, H:H.182, H:E.186, W:H.80, H2O.54 MN.33: 5 residues within 4Å: Chain I: H.79, E.83, H.158 Chain Q: H.183 Ligands: 83O.36 5 PLIP interactions: 3 interactions with chain I, 1 interactions with chain Q, 1 Ligand-Water interactions Metal complexes: I:H.79, I:E.83, I:H.158, Q:H.183, H2O.62 MN.34: 5 residues within 4Å: Chain I: H.53, H.182, E.186 Chain R: H.80 Ligands: 83O.72 5 PLIP interactions: 3 interactions with chain I, 1 interactions with chain R, 1 Ligand-Water interactions Metal complexes: I:H.53, I:H.182, I:E.186, R:H.80, H2O.61 MN.37: 5 residues within 4Å: Chain J: H.79, E.83, H.158 Chain R: H.183 Ligands: 83O.40 5 PLIP interactions: 1 interactions with chain R, 3 interactions with chain J, 1 Ligand-Water interactions Metal complexes: R:H.183, J:H.79, J:E.83, J:H.158, H2O.69 MN.38: 5 residues within 4Å: Chain J: H.53, H.182, E.186 Chain Q: H.80 Ligands: 83O.68 5 PLIP interactions: 3 interactions with chain J, 1 interactions with chain Q, 1 Ligand-Water interactions Metal complexes: J:H.53, J:H.182, J:E.186, Q:H.80, H2O.69 MN.41: 5 residues within 4Å: Chain K: H.79, E.83, H.158 Chain T: H.183 Ligands: 83O.44 5 PLIP interactions: 3 interactions with chain K, 1 interactions with chain T, 1 Ligand-Water interactions Metal complexes: K:H.79, K:E.83, K:H.158, T:H.183, H2O.76 MN.42: 5 residues within 4Å: Chain K: H.53, H.182, E.186 Chain S: H.80 Ligands: 83O.76 5 PLIP interactions: 3 interactions with chain K, 1 interactions with chain S, 1 Ligand-Water interactions Metal complexes: K:H.53, K:H.182, K:E.186, S:H.80, H2O.76 MN.45: 5 residues within 4Å: Chain L: H.79, E.83, H.158 Chain S: H.183 Ligands: 83O.48 5 PLIP interactions: 3 interactions with chain L, 1 interactions with chain S, 1 Ligand-Water interactions Metal complexes: L:H.79, L:E.83, L:H.158, S:H.183, H2O.84 MN.46: 5 residues within 4Å: Chain L: H.53, H.182, E.186 Chain T: H.80 Ligands: 83O.80 5 PLIP interactions: 3 interactions with chain L, 1 interactions with chain T, 1 Ligand-Water interactions Metal complexes: L:H.53, L:H.182, L:E.186, T:H.80, H2O.84 MN.49: 5 residues within 4Å: Chain D: H.183 Chain M: H.79, E.83, H.158 Ligands: 83O.52 5 PLIP interactions: 3 interactions with chain M, 1 interactions with chain D, 1 Ligand-Water interactions Metal complexes: M:H.79, M:E.83, M:H.158, D:H.183, H2O.91 MN.50: 5 residues within 4Å: Chain C: H.80 Chain M: H.53, H.182, E.186 Ligands: 83O.12 5 PLIP interactions: 3 interactions with chain M, 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: M:H.53, M:H.182, M:E.186, C:H.80, H2O.91 MN.53: 5 residues within 4Å: Chain C: H.183 Chain N: H.79, E.83, H.158 Ligands: 83O.56 5 PLIP interactions: 3 interactions with chain N, 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: N:H.79, N:E.83, N:H.158, C:H.183, H2O.99 MN.54: 5 residues within 4Å: Chain D: H.80 Chain N: H.53, H.182, E.186 Ligands: 83O.16 5 PLIP interactions: 3 interactions with chain N, 1 interactions with chain D, 1 Ligand-Water interactions Metal complexes: N:H.53, N:H.182, N:E.186, D:H.80, H2O.98 MN.57: 5 residues within 4Å: Chain A: H.183 Chain O: H.79, E.83, H.158 Ligands: 83O.60 5 PLIP interactions: 1 interactions with chain A, 3 interactions with chain O, 1 Ligand-Water interactions Metal complexes: A:H.183, O:H.79, O:E.83, O:H.158, H2O.106 MN.58: 5 residues within 4Å: Chain B: H.80 Chain O: H.53, H.182, E.186 Ligands: 83O.8 5 PLIP interactions: 3 interactions with chain O, 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: O:H.53, O:H.182, O:E.186, B:H.80, H2O.106 MN.61: 5 residues within 4Å: Chain B: H.183 Chain P: H.79, E.83, H.158 Ligands: 83O.64 5 PLIP interactions: 3 interactions with chain P, 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: P:H.79, P:E.83, P:H.158, B:H.183, H2O.114 MN.62: 5 residues within 4Å: Chain A: H.80 Chain P: H.53, H.182, E.186 Ligands: 83O.4 5 PLIP interactions: 3 interactions with chain P, 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: P:H.53, P:H.182, P:E.186, A:H.80, H2O.113 MN.65: 5 residues within 4Å: Chain J: H.183 Chain Q: H.79, E.83, H.158 Ligands: 83O.68 5 PLIP interactions: 3 interactions with chain Q, 1 interactions with chain J, 1 Ligand-Water interactions Metal complexes: Q:H.79, Q:E.83, Q:H.158, J:H.183, H2O.121 MN.66: 5 residues within 4Å: Chain I: H.80 Chain Q: H.53, H.182, E.186 Ligands: 83O.36 5 PLIP interactions: 1 interactions with chain I, 3 interactions with chain Q, 1 Ligand-Water interactions Metal complexes: I:H.80, Q:H.53, Q:H.182, Q:E.186, H2O.121 MN.69: 5 residues within 4Å: Chain I: H.183 Chain R: H.79, E.83, H.158 Ligands: 83O.72 5 PLIP interactions: 1 interactions with chain I, 3 interactions with chain R, 1 Ligand-Water interactions Metal complexes: I:H.183, R:H.79, R:E.83, R:H.158, H2O.129 MN.70: 5 residues within 4Å: Chain J: H.80 Chain R: H.53, H.182, E.186 Ligands: 83O.40 5 PLIP interactions: 3 interactions with chain R, 1 interactions with chain J, 1 Ligand-Water interactions Metal complexes: R:H.53, R:H.182, R:E.186, J:H.80, H2O.128 MN.73: 5 residues within 4Å: Chain K: H.183 Chain S: H.79, E.83, H.158 Ligands: 83O.76 5 PLIP interactions: 3 interactions with chain S, 1 interactions with chain K, 1 Ligand-Water interactions Metal complexes: S:H.79, S:E.83, S:H.158, K:H.183, H2O.136 MN.74: 5 residues within 4Å: Chain L: H.80 Chain S: H.53, H.182, E.186 Ligands: 83O.48 5 PLIP interactions: 1 interactions with chain L, 3 interactions with chain S, 1 Ligand-Water interactions Metal complexes: L:H.80, S:H.53, S:H.182, S:E.186, H2O.136 MN.77: 5 residues within 4Å: Chain L: H.183 Chain T: H.79, E.83, H.158 Ligands: 83O.80 5 PLIP interactions: 3 interactions with chain T, 1 interactions with chain L, 1 Ligand-Water interactions Metal complexes: T:H.79, T:E.83, T:H.158, L:H.183, H2O.144 MN.78: 5 residues within 4Å: Chain K: H.80 Chain T: H.53, H.182, E.186 Ligands: 83O.44 5 PLIP interactions: 1 interactions with chain K, 3 interactions with chain T, 1 Ligand-Water interactions Metal complexes: K:H.80, T:H.53, T:H.182, T:E.186, H2O.143 MN.81: 5 residues within 4Å: Chain E: H.183 Chain U: H.79, E.83, H.158 Ligands: 83O.84 5 PLIP interactions: 3 interactions with chain U, 1 interactions with chain E, 1 Ligand-Water interactions Metal complexes: U:H.79, U:E.83, U:H.158, E:H.183, H2O.151 MN.82: 5 residues within 4Å: Chain F: H.80 Chain U: H.53, H.182, E.186 Ligands: 83O.24 5 PLIP interactions: 3 interactions with chain U, 1 interactions with chain F, 1 Ligand-Water interactions Metal complexes: U:H.53, U:H.182, U:E.186, F:H.80, H2O.151 MN.85: 5 residues within 4Å: Chain F: H.183 Chain V: H.79, E.83, H.158 Ligands: 83O.88 5 PLIP interactions: 1 interactions with chain F, 3 interactions with chain V, 1 Ligand-Water interactions Metal complexes: F:H.183, V:H.79, V:E.83, V:H.158, H2O.159 MN.86: 5 residues within 4Å: Chain E: H.80 Chain V: H.53, H.182, E.186 Ligands: 83O.20 5 PLIP interactions: 3 interactions with chain V, 1 interactions with chain E, 1 Ligand-Water interactions Metal complexes: V:H.53, V:H.182, V:E.186, E:H.80, H2O.158 MN.89: 5 residues within 4Å: Chain H: H.183 Chain W: H.79, E.83, H.158 Ligands: 83O.92 5 PLIP interactions: 1 interactions with chain H, 3 interactions with chain W, 1 Ligand-Water interactions Metal complexes: H:H.183, W:H.79, W:E.83, W:H.158, H2O.166 MN.90: 5 residues within 4Å: Chain G: H.80 Chain W: H.53, H.182, E.186 Ligands: 83O.28 5 PLIP interactions: 3 interactions with chain W, 1 interactions with chain G, 1 Ligand-Water interactions Metal complexes: W:H.53, W:H.182, W:E.186, G:H.80, H2O.166 MN.93: 5 residues within 4Å: Chain G: H.183 Chain X: H.79, E.83, H.158 Ligands: 83O.96 5 PLIP interactions: 1 interactions with chain G, 3 interactions with chain X, 1 Ligand-Water interactions Metal complexes: G:H.183, X:H.79, X:E.83, X:H.158, H2O.173 MN.94: 5 residues within 4Å: Chain H: H.80 Chain X: H.53, H.182, E.186 Ligands: 83O.32 5 PLIP interactions: 1 interactions with chain H, 3 interactions with chain X, 1 Ligand-Water interactions Metal complexes: H:H.80, X:H.53, X:H.182, X:E.186, H2O.173

24 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 8 residues within 4Å: Chain A: F.110, R.174 Chain G: F.110, R.174 Chain J: F.110, R.174 Ligands: CL.27, CL.39 Ligand excluded by PLIP CL.7: 8 residues within 4Å: Chain B: F.110, R.174 Chain E: F.110, R.174 Chain K: F.110, R.174 Ligands: CL.19, CL.43 Ligand excluded by PLIP CL.11: 8 residues within 4Å: Chain C: F.110, R.174 Chain F: F.110, R.174 Chain I: F.110, R.174 Ligands: CL.23, CL.35 Ligand excluded by PLIP CL.15: 8 residues within 4Å: Chain D: F.110, R.174 Chain H: F.110, R.174 Chain L: F.110, R.174 Ligands: CL.31, CL.47 Ligand excluded by PLIP CL.19: 8 residues within 4Å: Chain B: F.110, R.174 Chain E: F.110, R.174 Chain K: F.110, R.174 Ligands: CL.7, CL.43 Ligand excluded by PLIP CL.23: 8 residues within 4Å: Chain C: F.110, R.174 Chain F: F.110, R.174 Chain I: F.110, R.174 Ligands: CL.11, CL.35 Ligand excluded by PLIP CL.27: 8 residues within 4Å: Chain A: F.110, R.174 Chain G: F.110, R.174 Chain J: F.110, R.174 Ligands: CL.3, CL.39 Ligand excluded by PLIP CL.31: 8 residues within 4Å: Chain D: F.110, R.174 Chain H: F.110, R.174 Chain L: F.110, R.174 Ligands: CL.15, CL.47 Ligand excluded by PLIP CL.35: 8 residues within 4Å: Chain C: F.110, R.174 Chain F: F.110, R.174 Chain I: F.110, R.174 Ligands: CL.11, CL.23 Ligand excluded by PLIP CL.39: 8 residues within 4Å: Chain A: F.110, R.174 Chain G: F.110, R.174 Chain J: F.110, R.174 Ligands: CL.3, CL.27 Ligand excluded by PLIP CL.43: 8 residues within 4Å: Chain B: F.110, R.174 Chain E: F.110, R.174 Chain K: F.110, R.174 Ligands: CL.7, CL.19 Ligand excluded by PLIP CL.47: 8 residues within 4Å: Chain D: F.110, R.174 Chain H: F.110, R.174 Chain L: F.110, R.174 Ligands: CL.15, CL.31 Ligand excluded by PLIP CL.51: 8 residues within 4Å: Chain M: F.110, R.174 Chain S: F.110, R.174 Chain V: F.110, R.174 Ligands: CL.75, CL.87 Ligand excluded by PLIP CL.55: 8 residues within 4Å: Chain N: F.110, R.174 Chain Q: F.110, R.174 Chain W: F.110, R.174 Ligands: CL.67, CL.91 Ligand excluded by PLIP CL.59: 8 residues within 4Å: Chain O: F.110, R.174 Chain R: F.110, R.174 Chain U: F.110, R.174 Ligands: CL.71, CL.83 Ligand excluded by PLIP CL.63: 8 residues within 4Å: Chain P: F.110, R.174 Chain T: F.110, R.174 Chain X: F.110, R.174 Ligands: CL.79, CL.95 Ligand excluded by PLIP CL.67: 8 residues within 4Å: Chain N: F.110, R.174 Chain Q: F.110, R.174 Chain W: F.110, R.174 Ligands: CL.55, CL.91 Ligand excluded by PLIP CL.71: 8 residues within 4Å: Chain O: F.110, R.174 Chain R: F.110, R.174 Chain U: F.110, R.174 Ligands: CL.59, CL.83 Ligand excluded by PLIP CL.75: 8 residues within 4Å: Chain M: F.110, R.174 Chain S: F.110, R.174 Chain V: F.110, R.174 Ligands: CL.51, CL.87 Ligand excluded by PLIP CL.79: 8 residues within 4Å: Chain P: F.110, R.174 Chain T: F.110, R.174 Chain X: F.110, R.174 Ligands: CL.63, CL.95 Ligand excluded by PLIP CL.83: 8 residues within 4Å: Chain O: F.110, R.174 Chain R: F.110, R.174 Chain U: F.110, R.174 Ligands: CL.59, CL.71 Ligand excluded by PLIP CL.87: 8 residues within 4Å: Chain M: F.110, R.174 Chain S: F.110, R.174 Chain V: F.110, R.174 Ligands: CL.51, CL.75 Ligand excluded by PLIP CL.91: 8 residues within 4Å: Chain N: F.110, R.174 Chain Q: F.110, R.174 Chain W: F.110, R.174 Ligands: CL.55, CL.67 Ligand excluded by PLIP CL.95: 8 residues within 4Å: Chain P: F.110, R.174 Chain T: F.110, R.174 Chain X: F.110, R.174 Ligands: CL.63, CL.79 Ligand excluded by PLIP

24 x 83O: (2S)-2-azanyl-3-(4H-1,2,4-triazol-3-yl)propanoic acid(Non-covalent)

83O.4: 10 residues within 4Å: Chain A: H.79, H.80, E.83 Chain P: M.113, H.182, H.183, E.186 Chain X: R.127 Ligands: MN.1, MN.62 11 PLIP interactions: 9 interactions with chain A, 1 interactions with chain P, 1 interactions with chain X Water bridges: A:E.27, A:E.27, A:E.27, A:E.83, A:E.83, A:D.84, A:D.84, A:D.84, A:D.84 Salt bridges: P:K.190, X:R.127 83O.8: 10 residues within 4Å: Chain B: H.79, H.80, E.83 Chain O: M.113, H.182, H.183, E.186 Chain U: R.127 Ligands: MN.5, MN.58 11 PLIP interactions: 9 interactions with chain B, 1 interactions with chain U, 1 interactions with chain O Water bridges: B:E.27, B:E.27, B:E.27, B:E.83, B:E.83, B:D.84, B:D.84, B:D.84, B:D.84 Salt bridges: U:R.127, O:K.190 83O.12: 10 residues within 4Å: Chain C: H.79, H.80, E.83 Chain M: M.113, H.182, H.183, E.186 Chain V: R.127 Ligands: MN.9, MN.50 11 PLIP interactions: 9 interactions with chain C, 1 interactions with chain V, 1 interactions with chain M Water bridges: C:E.27, C:E.27, C:E.27, C:E.83, C:E.83, C:D.84, C:D.84, C:D.84, C:D.84 Salt bridges: V:R.127, M:K.190 83O.16: 10 residues within 4Å: Chain D: H.79, H.80, E.83 Chain N: M.113, H.182, H.183, E.186 Chain W: R.127 Ligands: MN.13, MN.54 11 PLIP interactions: 1 interactions with chain N, 9 interactions with chain D, 1 interactions with chain W Salt bridges: N:K.190, W:R.127 Water bridges: D:E.27, D:E.27, D:E.27, D:E.83, D:E.83, D:D.84, D:D.84, D:D.84, D:D.84 83O.20: 10 residues within 4Å: Chain E: H.79, H.80, E.83 Chain S: R.127 Chain V: M.113, H.182, H.183, E.186 Ligands: MN.17, MN.86 11 PLIP interactions: 9 interactions with chain E, 1 interactions with chain S, 1 interactions with chain V Water bridges: E:E.27, E:E.27, E:E.27, E:E.83, E:E.83, E:D.84, E:D.84, E:D.84, E:D.84 Salt bridges: S:R.127, V:K.190 83O.24: 10 residues within 4Å: Chain F: H.79, H.80, E.83 Chain R: R.127 Chain U: M.113, H.182, H.183, E.186 Ligands: MN.21, MN.82 11 PLIP interactions: 9 interactions with chain F, 1 interactions with chain R, 1 interactions with chain U Water bridges: F:E.27, F:E.27, F:E.27, F:E.83, F:E.83, F:D.84, F:D.84, F:D.84, F:D.84 Salt bridges: R:R.127, U:K.190 83O.28: 10 residues within 4Å: Chain G: H.79, H.80, E.83 Chain Q: R.127 Chain W: M.113, H.182, H.183, E.186 Ligands: MN.25, MN.90 11 PLIP interactions: 1 interactions with chain Q, 1 interactions with chain W, 9 interactions with chain G Salt bridges: Q:R.127, W:K.190 Water bridges: G:E.27, G:E.27, G:E.27, G:E.83, G:E.83, G:D.84, G:D.84, G:D.84, G:D.84 83O.32: 10 residues within 4Å: Chain H: H.79, H.80, E.83 Chain T: R.127 Chain X: M.113, H.182, H.183, E.186 Ligands: MN.29, MN.94 11 PLIP interactions: 1 interactions with chain T, 9 interactions with chain H, 1 interactions with chain X Salt bridges: T:R.127, X:K.190 Water bridges: H:E.27, H:E.27, H:E.27, H:E.83, H:E.83, H:D.84, H:D.84, H:D.84, H:D.84 83O.36: 10 residues within 4Å: Chain I: H.79, H.80, E.83 Chain N: R.127 Chain Q: M.113, H.182, H.183, E.186 Ligands: MN.33, MN.66 11 PLIP interactions: 1 interactions with chain N, 9 interactions with chain I, 1 interactions with chain Q Salt bridges: N:R.127, Q:K.190 Water bridges: I:E.27, I:E.27, I:E.27, I:E.83, I:E.83, I:D.84, I:D.84, I:D.84, I:D.84 83O.40: 10 residues within 4Å: Chain J: H.79, H.80, E.83 Chain O: R.127 Chain R: M.113, H.182, H.183, E.186 Ligands: MN.37, MN.70 11 PLIP interactions: 1 interactions with chain R, 9 interactions with chain J, 1 interactions with chain O Salt bridges: R:K.190, O:R.127 Water bridges: J:E.27, J:E.27, J:E.27, J:E.83, J:E.83, J:D.84, J:D.84, J:D.84, J:D.84 83O.44: 10 residues within 4Å: Chain K: H.79, H.80, E.83 Chain P: R.127 Chain T: M.113, H.182, H.183, E.186 Ligands: MN.41, MN.78 11 PLIP interactions: 1 interactions with chain T, 9 interactions with chain K, 1 interactions with chain P Salt bridges: T:K.190, P:R.127 Water bridges: K:E.27, K:E.27, K:E.27, K:E.83, K:E.83, K:D.84, K:D.84, K:D.84, K:D.84 83O.48: 10 residues within 4Å: Chain L: H.79, H.80, E.83 Chain M: R.127 Chain S: M.113, H.182, H.183, E.186 Ligands: MN.45, MN.74 11 PLIP interactions: 9 interactions with chain L, 1 interactions with chain S, 1 interactions with chain M Water bridges: L:E.27, L:E.27, L:E.27, L:E.83, L:E.83, L:D.84, L:D.84, L:D.84, L:D.84 Salt bridges: S:K.190, M:R.127 83O.52: 10 residues within 4Å: Chain D: M.113, H.182, H.183, E.186 Chain L: R.127 Chain M: H.79, H.80, E.83 Ligands: MN.14, MN.49 11 PLIP interactions: 1 interactions with chain L, 1 interactions with chain D, 9 interactions with chain M Salt bridges: L:R.127, D:K.190 Water bridges: M:E.27, M:E.27, M:E.27, M:E.83, M:E.83, M:D.84, M:D.84, M:D.84, M:D.84 83O.56: 10 residues within 4Å: Chain C: M.113, H.182, H.183, E.186 Chain I: R.127 Chain N: H.79, H.80, E.83 Ligands: MN.10, MN.53 11 PLIP interactions: 9 interactions with chain N, 1 interactions with chain C, 1 interactions with chain I Water bridges: N:E.27, N:E.27, N:E.27, N:E.83, N:E.83, N:D.84, N:D.84, N:D.84, N:D.84 Salt bridges: C:K.190, I:R.127 83O.60: 10 residues within 4Å: Chain A: M.113, H.182, H.183, E.186 Chain J: R.127 Chain O: H.79, H.80, E.83 Ligands: MN.2, MN.57 11 PLIP interactions: 1 interactions with chain A, 9 interactions with chain O, 1 interactions with chain J Salt bridges: A:K.190, J:R.127 Water bridges: O:E.27, O:E.27, O:E.27, O:E.83, O:E.83, O:D.84, O:D.84, O:D.84, O:D.84 83O.64: 10 residues within 4Å: Chain B: M.113, H.182, H.183, E.186 Chain K: R.127 Chain P: H.79, H.80, E.83 Ligands: MN.6, MN.61 11 PLIP interactions: 1 interactions with chain K, 9 interactions with chain P, 1 interactions with chain B Salt bridges: K:R.127, B:K.190 Water bridges: P:E.27, P:E.27, P:E.27, P:E.83, P:E.83, P:D.84, P:D.84, P:D.84, P:D.84 83O.68: 10 residues within 4Å: Chain G: R.127 Chain J: M.113, H.182, H.183, E.186 Chain Q: H.79, H.80, E.83 Ligands: MN.38, MN.65 11 PLIP interactions: 9 interactions with chain Q, 1 interactions with chain G, 1 interactions with chain J Water bridges: Q:E.27, Q:E.27, Q:E.27, Q:E.83, Q:E.83, Q:D.84, Q:D.84, Q:D.84, Q:D.84 Salt bridges: G:R.127, J:K.190 83O.72: 10 residues within 4Å: Chain F: R.127 Chain I: M.113, H.182, H.183, E.186 Chain R: H.79, H.80, E.83 Ligands: MN.34, MN.69 11 PLIP interactions: 9 interactions with chain R, 1 interactions with chain I, 1 interactions with chain F Water bridges: R:E.27, R:E.27, R:E.27, R:E.83, R:E.83, R:D.84, R:D.84, R:D.84, R:D.84 Salt bridges: I:K.190, F:R.127 83O.76: 10 residues within 4Å: Chain E: R.127 Chain K: M.113, H.182, H.183, E.186 Chain S: H.79, H.80, E.83 Ligands: MN.42, MN.73 11 PLIP interactions: 9 interactions with chain S, 1 interactions with chain E, 1 interactions with chain K Water bridges: S:E.27, S:E.27, S:E.27, S:E.83, S:E.83, S:D.84, S:D.84, S:D.84, S:D.84 Salt bridges: E:R.127, K:K.190 83O.80: 10 residues within 4Å: Chain H: R.127 Chain L: M.113, H.182, H.183, E.186 Chain T: H.79, H.80, E.83 Ligands: MN.46, MN.77 11 PLIP interactions: 9 interactions with chain T, 1 interactions with chain L, 1 interactions with chain H Water bridges: T:E.27, T:E.27, T:E.27, T:E.83, T:E.83, T:D.84, T:D.84, T:D.84, T:D.84 Salt bridges: L:K.190, H:R.127 83O.84: 10 residues within 4Å: Chain B: R.127 Chain E: M.113, H.182, H.183, E.186 Chain U: H.79, H.80, E.83 Ligands: MN.18, MN.81 11 PLIP interactions: 1 interactions with chain B, 9 interactions with chain U, 1 interactions with chain E Salt bridges: B:R.127, E:K.190 Water bridges: U:E.27, U:E.27, U:E.27, U:E.83, U:E.83, U:D.84, U:D.84, U:D.84, U:D.84 83O.88: 10 residues within 4Å: Chain C: R.127 Chain F: M.113, H.182, H.183, E.186 Chain V: H.79, H.80, E.83 Ligands: MN.22, MN.85 11 PLIP interactions: 9 interactions with chain V, 1 interactions with chain C, 1 interactions with chain F Water bridges: V:E.27, V:E.27, V:E.27, V:E.83, V:E.83, V:D.84, V:D.84, V:D.84, V:D.84 Salt bridges: C:R.127, F:K.190 83O.92: 10 residues within 4Å: Chain D: R.127 Chain H: M.113, H.182, H.183, E.186 Chain W: H.79, H.80, E.83 Ligands: MN.30, MN.89 11 PLIP interactions: 1 interactions with chain H, 9 interactions with chain W, 1 interactions with chain D Salt bridges: H:K.190, D:R.127 Water bridges: W:E.27, W:E.27, W:E.27, W:E.83, W:E.83, W:D.84, W:D.84, W:D.84, W:D.84 83O.96: 10 residues within 4Å: Chain A: R.127 Chain G: M.113, H.182, H.183, E.186 Chain X: H.79, H.80, E.83 Ligands: MN.26, MN.93 11 PLIP interactions: 1 interactions with chain G, 9 interactions with chain X, 1 interactions with chain A Salt bridges: G:K.190, A:R.127 Water bridges: X:E.27, X:E.27, X:E.27, X:E.83, X:E.83, X:D.84, X:D.84, X:D.84, X:D.84

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumar, D. et al., Characterization of a triazole scaffold compound as an inhibitor of Mycobacterium tuberculosis imidazoleglycerol-phosphate dehydratase. Proteins (2021)

Release Date

2018-04-04

Peptides

Imidazoleglycerol-phosphate dehydratase: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

I
A

J
A

K
A

L
A

M
A

N
A

O
A

P
A

Q
A

R
A

S
A

T
A

U
A

V
A

W
A

X
A

Imidazoleglycerol-phosphate dehydratase

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