SMTL ID : 5zp8.1

Copper amine oxidase from Arthrobacter globiformis anaerobically reduced by ethylamine at pH 6 at 277 K (4)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

homo-dimer

Ligands

2 x CU: COPPER (II) ION(Non-covalent)

CU.1: 3 residues within 4Å: Chain A: H.423, H.425, H.584 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.423, A:H.425, A:H.584, H2O.2, H2O.14 CU.3: 3 residues within 4Å: Chain B: H.423, H.425, H.584 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.423, B:H.425, B:H.584, H2O.23, H2O.35

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 6 residues within 4Å: Chain A: R.41, D.432, M.433, F.438, D.573, I.574 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.41, A:D.573, A:D.573, A:I.574 NA.4: 6 residues within 4Å: Chain B: R.41, D.432, M.433, F.438, D.573, I.574 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.41, B:D.573, B:I.574

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 9 residues within 4Å: Chain B: A.7, L.34, G.35, V.36, F.241, D.242, V.243, V.319, I.320 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:V.36, B:D.242, B:V.243 Water bridges: B:L.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murakawa, T. et al., In crystallothermodynamic analysis of conformational change of the topaquinone cofactor in bacterial copper amine oxidase. Proc. Natl. Acad. Sci. U.S.A. (2019)

Release Date

2018-12-19

Peptides

Phenylethylamine oxidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Phenylethylamine oxidase

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