SMTL ID : 6aol.1

Structure of molecular chaperone Grp94 bound to selective inhibitor methyl 3-chloro-2-(2-{2-[(4-fluorophenyl)methyl]phenyl}ethyl)-4,6-dihydroxybenzoate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.76 Å

Oligo State

monomer

Ligands

1 x VC1: methyl 3-chloro-2-(2-{2-[(4-fluorophenyl)methyl]phenyl}ethyl)-4,6-dihydroxybenzoate(Non-covalent)

VC1.1: 19 residues within 4Å: Chain A: M.18, L.37, N.40, A.41, A.44, D.82, V.85, G.86, M.87, N.95, L.96, T.98, I.99, G.129, V.130, F.132, Y.133, T.178, I.180 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:N.95, A:L.96, A:V.130, A:Y.133, A:T.178 Hydrogen bonds: A:L.37, A:D.82, A:G.86, A:T.178

4 x P33: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL(Non-covalent)

P33.2: 5 residues within 4Å: Chain A: K.8, K.141, E.157, D.159, E.162 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.8, A:E.157, A:D.159, A:D.159 P33.3: 5 residues within 4Å: Chain A: N.16, K.20, I.23, S.160, N.161 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.160 P33.4: 2 residues within 4Å: Chain A: T.145, R.170 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.145, A:R.170, A:R.170 P33.5: 1 residues within 4Å: Chain A: K.47 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Crowley, V.M. et al., Second Generation Grp94-Selective Inhibitors Provide Opportunities for the Inhibition of Metastatic Cancer. Chemistry (2017)

Release Date

2017-10-11

Peptides

Endoplasmin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Endoplasmin

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