SMTL ID : 6aws.3 (2 other biounits)

Structure of PR 10 Allergen Ara h 8.01 in complex with quercetin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: P.31, I.34, D.35, V.37 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.37

3 x QUE: 3,5,7,3',4'-PENTAHYDROXYFLAVONE(Non-covalent)

QUE.2: 15 residues within 4Å: Chain A: D.8, E.9, I.10, M.23, Y.80, Y.82, T.101, G.113, K.114, L.115, K.136, G.139, E.140, F.143 Ligands: QUE.3 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.10, A:Y.82, A:T.101, A:L.115 Hydrogen bonds: A:E.9, A:K.102, A:K.114 QUE.3: 10 residues within 4Å: Chain A: D.8, A.89, F.99, L.115, L.117, L.132, G.135, K.136, G.139 Ligands: QUE.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:D.8, A:F.99, A:F.99, A:L.117, A:K.136, A:K.136 Hydrogen bonds: A:A.89 QUE.4: 11 residues within 4Å: Chain A: V.37, I.57, E.59, I.66, H.68, Y.82, V.88, A.89, E.131, K.134, K.138 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.66, A:V.88, A:A.89 Hydrogen bonds: A:E.59, A:Y.82, A:Y.82, A:E.131, A:K.134, A:K.134

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Offermann, L.R. et al., Structure of PR-10 Allergen Ara h 8.01. To Be Published

Release Date

2018-09-12

Peptides

Ara h 8 allergen: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Ara h 8 allergen

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