SMTL ID : 6ax0.2 (1 other biounit)

Structure of PR-10 Allergen Ara h 8.01 in complex with epicatechin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: P.31, I.34, D.35, V.37 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.35

1 x 28E: (2R,3R)-2-(3,4-dihydroxyphenyl)-3,4-dihydro-2H-chromene-3,5,7-triol(Non-covalent)

28E.2: 12 residues within 4Å: Chain A: A.26, D.27, T.30, I.34, V.37, V.40, L.55, H.68, Y.80, Y.82, K.138, G.141 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.37, A:L.55 Hydrogen bonds: A:D.27, A:D.27, A:T.30 Water bridges: A:H.68 pi-Stacking: A:H.68

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Offermann, L.R. et al., Structure of PR-10 Allergen Ara h 8.01. To Be Published

Release Date

2018-09-12

Peptides

Ara h 8 allergen: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Ara h 8 allergen

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