SMTL ID : 6bdr.1 (1 other biounit)

Schistosoma mansoni (Blood Fluke) Sulfotransferase/CIDD-0000206 (Compound 9f) Complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

monomer

Ligands

1 x A3P: ADENOSINE-3'-5'-DIPHOSPHATE(Non-covalent)

A3P.1: 18 residues within 4Å: Chain A: P.18, R.19, T.20, G.21, T.22, K.23, S.24, R.117, S.125, L.205, G.206, Y.226, P.227, C.228, V.229, N.230, S.231, H.232 21 PLIP interactions: 21 interactions with chain A Hydrogen bonds: A:R.19, A:T.20, A:G.21, A:T.22, A:T.22, A:K.23, A:S.24, A:S.125, A:G.206, A:P.227, A:V.229, A:N.230, A:H.232 Water bridges: A:R.19, A:S.24, A:S.24, A:H.232 Salt bridges: A:R.19, A:R.19, A:R.117, A:H.232

2 x DF7: [4-({(3R)-1-[(1H-indol-3-yl)methyl]pyrrolidin-3-yl}amino)-2-nitrophenyl]methanol(Non-covalent)

DF7.2: 16 residues within 4Å: Chain A: P.18, H.39, M.40, F.41, D.93, L.94, V.129, V.130, K.139, I.142, E.143, D.146, F.155, Y.156, T.159, E.160 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:M.40, A:F.41, A:V.130, A:V.130, A:I.142 Hydrogen bonds: A:H.39, A:E.143 Salt bridges: A:D.146 pi-Stacking: A:Y.156, A:Y.156 DF7.3: 4 residues within 4Å: Chain A: L.70, Y.78, N.105, P.108 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rugel, A. et al., Design, Synthesis, and Characterization of Novel Small Molecules as Broad Range Antischistosomal Agents. ACS Med Chem Lett (2018)

Release Date

2018-10-03

Peptides

Sulfotransferase oxamniquine resistance protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Sulfotransferase oxamniquine resistance protein

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