SMTL ID : 6btn.1 (1 other biounit)

BMP1 complexed with a reverse hydroxymate - compound 1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 2 residues within 4Å: Chain A: T.157 Ligands: E8M.4 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.157

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: H.94, H.98, H.104 Ligands: E8M.4 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.94, A:H.98, A:H.104 ZN.3: 4 residues within 4Å: Chain A: X.1, A.2, E.105, Q.193 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:?.1, A:E.105, A:E.105, H2O.1, H2O.3

1 x E8M: (3S)-6-cyclohexyl-3-{3-[(dimethylamino)methyl]-1,2,4-oxadiazol-5-yl}-N-hydroxyhexanamide(Non-covalent)

E8M.4: 17 residues within 4Å: Chain A: N.85, G.90, I.91, H.94, E.95, H.98, H.104, N.129, I.150, H.152, Y.153, T.157, F.158, G.181, R.183 Ligands: EDO.1, ZN.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.91, A:H.94, A:I.150, A:Y.153, A:F.158 Water bridges: A:F.158 pi-Stacking: A:F.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kallander, L.S. et al., Reverse Hydroxamate Inhibitors of Bone Morphogenetic Protein 1. ACS Med Chem Lett (2018)

Release Date

2018-08-08

Peptides

Bone morphogenetic protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bone morphogenetic protein 1

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