SMTL ID : 6d9x.1

Discovery of Potent 2-Aryl-6,7-Dihydro-5HPyrrolo[ 1,2-a]imidazoles as WDR5 WIN-site Inhibitors Using Fragment-Based Methods and Structure-Based Design

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 6 residues within 4Å: Chain A: S.197, A.211, N.236, Y.239, C.240, I.241 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.236, A:N.236, A:I.241

1 x FZM: 2-phenyl-6,7-dihydro-5H-pyrrolo[1,2-a]imidazole(Non-covalent)

FZM.2: 10 residues within 4Å: Chain A: S.28, S.70, D.71, F.112, C.113, S.154, F.198, C.240, F.242, I.284 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.112, A:F.198, A:I.284 pi-Stacking: A:F.112, A:F.242

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, F. et al., Discovery of Potent 2-Aryl-6,7-dihydro-5 H-pyrrolo[1,2- a]imidazoles as WDR5-WIN-Site Inhibitors Using Fragment-Based Methods and Structure-Based Design. J. Med. Chem. (2018)

Release Date

2018-09-05

Peptides

WD repeat-containing protein 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

WD repeat-containing protein 5

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