SMTL ID : 6dgl.1 (1 other biounit)

Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with Darglitazone

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x GEV: (5Z)-5-({4-[3-(5-methyl-2-phenyl-1,3-oxazol-4-yl)propanoyl]phenyl}methylidene)-1,3-thiazolidine-2,4-dione(Non-covalent)

GEV.1: 19 residues within 4Å: Chain A: F.63, I.80, F.81, G.83, C.84, Q.85, S.88, H.122, I.125, Y.126, L.129, V.138, L.139, I.140, M.163, H.248, L.252, L.268, Y.272 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.63, A:I.125, A:L.129, A:V.138 Hydrogen bonds: A:S.88, A:Y.272 pi-Stacking: A:H.248

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shang, J. et al., Quantitative structural assessment of graded receptor agonism. Proc.Natl.Acad.Sci.USA (2019)

Release Date

2019-05-22

Peptides

Peroxisome proliferator-activated receptor gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peroxisome proliferator-activated receptor gamma

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