SMTL ID : 6dte.2 (1 other biounit)

GlcNAc-inspired cyclophellitol bound to NagZ

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

monomer

Ligands

1 x H9J: 2,2,2-trifluoro-N-[(1R,2R,3R,4R,5R,6R)-2,3,5,6-tetrahydroxy-4-(hydroxymethyl)cyclohexyl]acetamide(Covalent)

H9J.1: 21 residues within 4Å: Chain A: I.42, F.44, D.73, E.75, R.81, F.131, V.144, I.145, R.148, K.178, H.179, H.183, D.189, S.190, H.191, I.223, D.261, D.262, M.265, L.290, C.292 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:D.261 Hydrogen bonds: A:D.73, A:D.73, A:R.148, A:R.148, A:K.178, A:H.179, A:D.261 Water bridges: A:H.191

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ho, L.A. et al., A mechanism-based GlcNAc-inspired cyclophellitol inactivator of the peptidoglycan recycling enzyme NagZ reverses resistance to beta-lactams in Pseudomonas aeruginosa. Chem. Commun. (Camb.) (2018)

Release Date

2019-04-24

Peptides

Beta-hexosaminidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-hexosaminidase

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