SMTL ID : 6g33.3 (2 other biounits)

Crystal structure of CLK1 in complex with 5-iodotubercidin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x 5ID: (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL(Non-covalent)

5ID.1: 15 residues within 4Å: Chain A: L.22, G.23, E.24, F.27, V.30, A.44, F.96, E.97, L.99, G.100, S.102, D.105, E.147, L.150 Ligands: IOD.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.30, A:L.150 Hydrogen bonds: A:L.22, A:E.97, A:L.99 Water bridges: A:S.102, A:S.102, A:S.102

1 x IOD: IODIDE ION(Non-functional Binders)

IOD.2: 3 residues within 4Å: Chain A: K.46, D.180 Ligands: 5ID.1 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Heroven, C. et al., Halogen-Aromatic pi Interactions Modulate Inhibitor Residence Times. Angew. Chem. Int. Ed. Engl. (2018)

Release Date

2018-04-18

Peptides

Dual specificity protein kinase CLK1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Dual specificity protein kinase CLK1

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