SMTL ID : 6zln.1

CLK1 bound with GW807982X (Cpd 8)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: T.193, E.204, V.205, A.208, L.209, G.210, W.211 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.193, A:G.210, A:G.210 EDO.2: 3 residues within 4Å: Chain A: L.98, V.152, Q.153 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.152

1 x PKB: 4-(6-ethoxypyrazolo[1,5-b]pyridazin-3-yl)-~{N}-[3-methoxy-5-(trifluoromethyl)phenyl]pyrimidin-2-amine(Non-covalent)

PKB.3: 16 residues within 4Å: Chain A: L.22, G.23, V.30, A.44, K.46, F.96, E.97, L.98, L.99, G.100, L.101, E.147, N.148, L.150, V.179, D.180 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.22, A:L.22, A:F.96, A:L.150 Hydrogen bonds: A:K.46, A:L.99, A:L.99 Water bridges: A:D.180 pi-Stacking: A:F.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schroder, M. et al., DFG-1 Residue Controls Inhibitor Binding Mode and Affinity, Providing a Basis for Rational Design of Kinase Inhibitor Selectivity. J.Med.Chem. (2020)

Release Date

2020-08-26

Peptides

Dual specificity protein kinase CLK1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dual specificity protein kinase CLK1

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