- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- hetero-6-6-mer
- Ligands
- 12 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 12 x 8M0: bis(mu4-oxo)-tetrakis(mu3-oxo)-hexakis(mu2-oxo)-hexadecaoxo-octamolybdenum (VI)(Non-covalent)
8M0.2: 17 residues within 4Å:- Chain A: V.125, G.126, G.127, A.128, G.129, F.145, S.146, M.148, P.150, K.152, L.175, F.179
- Chain B: Y.154, H.155, H.156, H.157
- Ligands: 8M0.9
12 PLIP interactions:7 interactions with chain A, 5 interactions with chain B- Hydrogen bonds: A:G.127, A:A.128, A:G.129, A:M.148, A:K.152, A:K.152, B:H.155, B:H.156, B:H.156, B:H.157, B:H.157
- Water bridges: A:S.146
8M0.9: 15 residues within 4Å:- Chain B: P.102, A.105, S.106, G.109, Q.110, H.113, Y.126, E.128, H.129, P.130, S.149, P.152, P.153, H.155
- Ligands: 8M0.2
10 PLIP interactions:10 interactions with chain B- Hydrogen bonds: B:A.105, B:Q.110, B:H.113, B:Y.126, B:H.129, B:H.129, B:H.129, B:S.149
- Water bridges: B:S.106, B:S.106
8M0.15: 17 residues within 4Å:- Chain C: V.125, G.126, G.127, A.128, G.129, F.145, S.146, M.148, P.150, K.152, L.175, F.179
- Chain D: Y.154, H.155, H.156, H.157
- Ligands: 8M0.22
12 PLIP interactions:7 interactions with chain C, 5 interactions with chain D- Hydrogen bonds: C:G.127, C:A.128, C:G.129, C:M.148, C:K.152, C:K.152, D:H.155, D:H.156, D:H.156, D:H.157, D:H.157
- Water bridges: C:S.146
8M0.22: 15 residues within 4Å:- Chain D: P.102, A.105, S.106, G.109, Q.110, H.113, Y.126, E.128, H.129, P.130, S.149, P.152, P.153, H.155
- Ligands: 8M0.15
10 PLIP interactions:10 interactions with chain D- Hydrogen bonds: D:A.105, D:Q.110, D:H.113, D:Y.126, D:H.129, D:H.129, D:H.129, D:S.149
- Water bridges: D:S.106, D:S.106
8M0.28: 17 residues within 4Å:- Chain E: V.125, G.126, G.127, A.128, G.129, F.145, S.146, M.148, P.150, K.152, L.175, F.179
- Chain F: Y.154, H.155, H.156, H.157
- Ligands: 8M0.35
12 PLIP interactions:7 interactions with chain E, 5 interactions with chain F- Hydrogen bonds: E:G.127, E:A.128, E:G.129, E:M.148, E:K.152, E:K.152, F:H.155, F:H.156, F:H.156, F:H.157, F:H.157
- Water bridges: E:S.146
8M0.35: 15 residues within 4Å:- Chain F: P.102, A.105, S.106, G.109, Q.110, H.113, Y.126, E.128, H.129, P.130, S.149, P.152, P.153, H.155
- Ligands: 8M0.28
10 PLIP interactions:10 interactions with chain F- Hydrogen bonds: F:A.105, F:Q.110, F:H.113, F:Y.126, F:H.129, F:H.129, F:H.129, F:S.149
- Water bridges: F:S.106, F:S.106
8M0.41: 17 residues within 4Å:- Chain G: V.125, G.126, G.127, A.128, G.129, F.145, S.146, M.148, P.150, K.152, L.175, F.179
- Chain H: Y.154, H.155, H.156, H.157
- Ligands: 8M0.48
11 PLIP interactions:4 interactions with chain H, 7 interactions with chain G- Hydrogen bonds: H:H.155, H:H.156, H:H.156, H:H.157, G:G.127, G:A.128, G:G.129, G:M.148, G:K.152, G:K.152
- Water bridges: G:S.146
8M0.48: 15 residues within 4Å:- Chain H: P.102, A.105, S.106, G.109, Q.110, H.113, Y.126, E.128, H.129, P.130, S.149, P.152, P.153, H.155
- Ligands: 8M0.41
11 PLIP interactions:11 interactions with chain H- Hydrogen bonds: H:A.105, H:Q.110, H:H.113, H:E.128, H:H.129, H:H.129, H:S.149
- Water bridges: H:S.106, H:S.106, H:Y.126, H:V.127
8M0.54: 17 residues within 4Å:- Chain I: V.125, G.126, G.127, A.128, G.129, F.145, S.146, M.148, P.150, K.152, L.175, F.179
- Chain J: Y.154, H.155, H.156, H.157
- Ligands: 8M0.61
11 PLIP interactions:7 interactions with chain I, 4 interactions with chain J- Hydrogen bonds: I:G.127, I:A.128, I:G.129, I:M.148, I:K.152, I:K.152, J:H.155, J:H.156, J:H.156, J:H.157
- Water bridges: I:S.146
8M0.61: 15 residues within 4Å:- Chain J: P.102, A.105, S.106, G.109, Q.110, H.113, Y.126, E.128, H.129, P.130, S.149, P.152, P.153, H.155
- Ligands: 8M0.54
11 PLIP interactions:11 interactions with chain J- Hydrogen bonds: J:A.105, J:Q.110, J:H.113, J:E.128, J:H.129, J:H.129, J:S.149
- Water bridges: J:S.106, J:S.106, J:Y.126, J:V.127
8M0.67: 17 residues within 4Å:- Chain K: V.125, G.126, G.127, A.128, G.129, F.145, S.146, M.148, P.150, K.152, L.175, F.179
- Chain L: Y.154, H.155, H.156, H.157
- Ligands: 8M0.74
11 PLIP interactions:7 interactions with chain K, 4 interactions with chain L- Hydrogen bonds: K:G.127, K:A.128, K:G.129, K:M.148, K:K.152, K:K.152, L:H.155, L:H.156, L:H.156, L:H.157
- Water bridges: K:S.146
8M0.74: 15 residues within 4Å:- Chain L: P.102, A.105, S.106, G.109, Q.110, H.113, Y.126, E.128, H.129, P.130, S.149, P.152, P.153, H.155
- Ligands: 8M0.67
11 PLIP interactions:11 interactions with chain L- Hydrogen bonds: L:A.105, L:Q.110, L:H.113, L:E.128, L:H.129, L:H.129, L:S.149
- Water bridges: L:S.106, L:S.106, L:Y.126, L:V.127
- 42 x MO: MOLYBDENUM ATOM(Non-covalent)(Non-functional Binders)
MO.3: 10 residues within 4Å:- Chain A: S.131, P.134
- Ligands: MO.4, MO.5, MO.6, MO.18, MO.19, MO.30, MO.31, MO.32
Ligand excluded by PLIPMO.4: 8 residues within 4Å:- Chain C: S.131, V.133, P.134
- Ligands: MO.3, MO.16, MO.18, MO.19, MO.31
Ligand excluded by PLIPMO.5: 13 residues within 4Å:- Chain A: V.133
- Chain C: V.133
- Chain E: V.133
- Ligands: MO.3, MO.6, MO.16, MO.17, MO.18, MO.19, MO.29, MO.30, MO.31, MO.32
Ligand excluded by PLIPMO.6: 9 residues within 4Å:- Ligands: MO.3, MO.5, MO.16, MO.18, MO.19, MO.29, MO.30, MO.31, MO.32
Ligand excluded by PLIPMO.11: 6 residues within 4Å:- Chain B: T.131
- Ligands: MO.12, MO.13, MO.25, MO.26, MO.39
Ligand excluded by PLIPMO.12: 6 residues within 4Å:- Chain B: E.128
- Ligands: MO.11, MO.13, MO.26, MO.37, MO.39
Ligand excluded by PLIPMO.13: 8 residues within 4Å:- Ligands: MO.11, MO.12, MO.24, MO.25, MO.26, MO.37, MO.38, MO.39
Ligand excluded by PLIPMO.16: 10 residues within 4Å:- Chain C: S.131, P.134
- Ligands: MO.4, MO.5, MO.6, MO.17, MO.18, MO.19, MO.31, MO.32
Ligand excluded by PLIPMO.17: 8 residues within 4Å:- Chain E: S.131, V.133, P.134
- Ligands: MO.5, MO.16, MO.29, MO.31, MO.32
Ligand excluded by PLIPMO.18: 13 residues within 4Å:- Chain A: V.133
- Chain C: V.133
- Chain E: V.133
- Ligands: MO.3, MO.4, MO.5, MO.6, MO.16, MO.19, MO.29, MO.30, MO.31, MO.32
Ligand excluded by PLIPMO.19: 9 residues within 4Å:- Ligands: MO.3, MO.4, MO.5, MO.6, MO.16, MO.18, MO.29, MO.31, MO.32
Ligand excluded by PLIPMO.24: 6 residues within 4Å:- Chain D: T.131
- Ligands: MO.13, MO.25, MO.26, MO.38, MO.39
Ligand excluded by PLIPMO.25: 6 residues within 4Å:- Chain D: E.128
- Ligands: MO.11, MO.13, MO.24, MO.26, MO.39
Ligand excluded by PLIPMO.26: 8 residues within 4Å:- Ligands: MO.11, MO.12, MO.13, MO.24, MO.25, MO.37, MO.38, MO.39
Ligand excluded by PLIPMO.29: 10 residues within 4Å:- Chain E: S.131, P.134
- Ligands: MO.5, MO.6, MO.17, MO.18, MO.19, MO.30, MO.31, MO.32
Ligand excluded by PLIPMO.30: 8 residues within 4Å:- Chain A: S.131, V.133, P.134
- Ligands: MO.3, MO.5, MO.6, MO.18, MO.29
Ligand excluded by PLIPMO.31: 13 residues within 4Å:- Chain A: V.133
- Chain C: V.133
- Chain E: V.133
- Ligands: MO.3, MO.4, MO.5, MO.6, MO.16, MO.17, MO.18, MO.19, MO.29, MO.32
Ligand excluded by PLIPMO.32: 9 residues within 4Å:- Ligands: MO.3, MO.5, MO.6, MO.16, MO.17, MO.18, MO.19, MO.29, MO.31
Ligand excluded by PLIPMO.37: 6 residues within 4Å:- Chain F: T.131
- Ligands: MO.12, MO.13, MO.26, MO.38, MO.39
Ligand excluded by PLIPMO.38: 6 residues within 4Å:- Chain F: E.128
- Ligands: MO.13, MO.24, MO.26, MO.37, MO.39
Ligand excluded by PLIPMO.39: 8 residues within 4Å:- Ligands: MO.11, MO.12, MO.13, MO.24, MO.25, MO.26, MO.37, MO.38
Ligand excluded by PLIPMO.42: 10 residues within 4Å:- Chain G: S.131, P.134
- Ligands: MO.43, MO.44, MO.45, MO.57, MO.58, MO.69, MO.70, MO.71
Ligand excluded by PLIPMO.43: 8 residues within 4Å:- Chain I: S.131, V.133, P.134
- Ligands: MO.42, MO.55, MO.57, MO.58, MO.70
Ligand excluded by PLIPMO.44: 13 residues within 4Å:- Chain G: V.133
- Chain I: V.133
- Chain K: V.133
- Ligands: MO.42, MO.45, MO.55, MO.56, MO.57, MO.58, MO.68, MO.69, MO.70, MO.71
Ligand excluded by PLIPMO.45: 9 residues within 4Å:- Ligands: MO.42, MO.44, MO.55, MO.57, MO.58, MO.68, MO.69, MO.70, MO.71
Ligand excluded by PLIPMO.50: 6 residues within 4Å:- Chain H: T.131
- Ligands: MO.51, MO.52, MO.64, MO.65, MO.78
Ligand excluded by PLIPMO.51: 6 residues within 4Å:- Chain H: E.128
- Ligands: MO.50, MO.52, MO.65, MO.76, MO.78
Ligand excluded by PLIPMO.52: 8 residues within 4Å:- Ligands: MO.50, MO.51, MO.63, MO.64, MO.65, MO.76, MO.77, MO.78
Ligand excluded by PLIPMO.55: 10 residues within 4Å:- Chain I: S.131, P.134
- Ligands: MO.43, MO.44, MO.45, MO.56, MO.57, MO.58, MO.70, MO.71
Ligand excluded by PLIPMO.56: 8 residues within 4Å:- Chain K: S.131, V.133, P.134
- Ligands: MO.44, MO.55, MO.68, MO.70, MO.71
Ligand excluded by PLIPMO.57: 13 residues within 4Å:- Chain G: V.133
- Chain I: V.133
- Chain K: V.133
- Ligands: MO.42, MO.43, MO.44, MO.45, MO.55, MO.58, MO.68, MO.69, MO.70, MO.71
Ligand excluded by PLIPMO.58: 9 residues within 4Å:- Ligands: MO.42, MO.43, MO.44, MO.45, MO.55, MO.57, MO.68, MO.70, MO.71
Ligand excluded by PLIPMO.63: 6 residues within 4Å:- Chain J: T.131
- Ligands: MO.52, MO.64, MO.65, MO.77, MO.78
Ligand excluded by PLIPMO.64: 6 residues within 4Å:- Chain J: E.128
- Ligands: MO.50, MO.52, MO.63, MO.65, MO.78
Ligand excluded by PLIPMO.65: 8 residues within 4Å:- Ligands: MO.50, MO.51, MO.52, MO.63, MO.64, MO.76, MO.77, MO.78
Ligand excluded by PLIPMO.68: 10 residues within 4Å:- Chain K: S.131, P.134
- Ligands: MO.44, MO.45, MO.56, MO.57, MO.58, MO.69, MO.70, MO.71
Ligand excluded by PLIPMO.69: 8 residues within 4Å:- Chain G: S.131, V.133, P.134
- Ligands: MO.42, MO.44, MO.45, MO.57, MO.68
Ligand excluded by PLIPMO.70: 13 residues within 4Å:- Chain G: V.133
- Chain I: V.133
- Chain K: V.133
- Ligands: MO.42, MO.43, MO.44, MO.45, MO.55, MO.56, MO.57, MO.58, MO.68, MO.71
Ligand excluded by PLIPMO.71: 9 residues within 4Å:- Ligands: MO.42, MO.44, MO.45, MO.55, MO.56, MO.57, MO.58, MO.68, MO.70
Ligand excluded by PLIPMO.76: 6 residues within 4Å:- Chain L: T.131
- Ligands: MO.51, MO.52, MO.65, MO.77, MO.78
Ligand excluded by PLIPMO.77: 6 residues within 4Å:- Chain L: E.128
- Ligands: MO.52, MO.63, MO.65, MO.76, MO.78
Ligand excluded by PLIPMO.78: 8 residues within 4Å:- Ligands: MO.50, MO.51, MO.52, MO.63, MO.64, MO.65, MO.76, MO.77
Ligand excluded by PLIP- 6 x MG: MAGNESIUM ION(Non-covalent)
MG.8: 5 residues within 4Å:- Chain B: K.44, D.170, E.189, P.226
- Ligands: ATP.7
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:E.189, B:P.226, H2O.7, H2O.8
MG.21: 5 residues within 4Å:- Chain D: K.44, D.170, E.189, P.226
- Ligands: ATP.20
4 PLIP interactions:2 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: D:E.189, D:P.226, H2O.20, H2O.21
MG.34: 5 residues within 4Å:- Chain F: K.44, D.170, E.189, P.226
- Ligands: ATP.33
4 PLIP interactions:2 interactions with chain F, 2 Ligand-Water interactions- Metal complexes: F:E.189, F:P.226, H2O.33, H2O.34
MG.47: 5 residues within 4Å:- Chain H: K.44, D.170, E.189, P.226
- Ligands: ATP.46
4 PLIP interactions:2 interactions with chain H, 2 Ligand-Water interactions- Metal complexes: H:E.189, H:P.226, H2O.46, H2O.47
MG.60: 5 residues within 4Å:- Chain J: K.44, D.170, E.189, P.226
- Ligands: ATP.59
4 PLIP interactions:2 interactions with chain J, 2 Ligand-Water interactions- Metal complexes: J:E.189, J:P.226, H2O.59, H2O.60
MG.73: 5 residues within 4Å:- Chain L: K.44, D.170, E.189, P.226
- Ligands: ATP.72
4 PLIP interactions:2 interactions with chain L, 2 Ligand-Water interactions- Metal complexes: L:E.189, L:P.226, H2O.72, H2O.73
- 6 x MOO: MOLYBDATE ION(Non-covalent)
MOO.10: 7 residues within 4Å:- Chain B: T.131, H.139
- Chain F: Q.135, I.138, H.139
- Ligands: MOO.23, MOO.36
No protein-ligand interaction detected (PLIP)MOO.23: 7 residues within 4Å:- Chain B: Q.135, I.138, H.139
- Chain D: T.131, H.139
- Ligands: MOO.10, MOO.36
No protein-ligand interaction detected (PLIP)MOO.36: 7 residues within 4Å:- Chain D: Q.135, I.138, H.139
- Chain F: T.131, H.139
- Ligands: MOO.10, MOO.23
No protein-ligand interaction detected (PLIP)MOO.49: 7 residues within 4Å:- Chain H: T.131, H.139
- Chain L: Q.135, I.138, H.139
- Ligands: MOO.62, MOO.75
1 PLIP interactions:1 interactions with chain H- Hydrogen bonds: H:T.131
MOO.62: 7 residues within 4Å:- Chain H: Q.135, I.138, H.139
- Chain J: T.131, H.139
- Ligands: MOO.49, MOO.75
1 PLIP interactions:1 interactions with chain J- Hydrogen bonds: J:T.131
MOO.75: 7 residues within 4Å:- Chain J: Q.135, I.138, H.139
- Chain L: T.131, H.139
- Ligands: MOO.49, MOO.62
1 PLIP interactions:1 interactions with chain L- Hydrogen bonds: L:T.131
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Poppe, J. et al., The Molybdenum Storage Protein: A soluble ATP hydrolysis-dependent molybdate pump. FEBS J. (2018)
- Release Date
- 2018-11-07
- Peptides
- Molybdenum storage protein subunit beta: ACEGIK
Molybdenum storage protein subunit alpha: BDFHJL - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BC
BE
BG
BI
BK
BB
AD
AF
AH
AJ
AL
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- hetero-6-6-mer
- Ligands
- 12 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 12 x 8M0: bis(mu4-oxo)-tetrakis(mu3-oxo)-hexakis(mu2-oxo)-hexadecaoxo-octamolybdenum (VI)(Non-covalent)
- 42 x MO: MOLYBDENUM ATOM(Non-covalent)(Non-functional Binders)
- 6 x MG: MAGNESIUM ION(Non-covalent)
- 6 x MOO: MOLYBDATE ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Poppe, J. et al., The Molybdenum Storage Protein: A soluble ATP hydrolysis-dependent molybdate pump. FEBS J. (2018)
- Release Date
- 2018-11-07
- Peptides
- Molybdenum storage protein subunit beta: ACEGIK
Molybdenum storage protein subunit alpha: BDFHJL - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BC
BE
BG
BI
BK
BB
AD
AF
AH
AJ
AL
A