- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 6 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 6 x FUQ: Mo5 Cluster(Non-covalent)
FUQ.2: 14 residues within 4Å:- Chain A: G.126, G.127, A.128, G.129, L.130, S.131
- Chain B: P.102, A.155, H.156
- Chain E: D.107, A.111, Q.115, V.124
- Ligands: 8M0.7
9 PLIP interactions:6 interactions with chain A, 2 interactions with chain B, 1 interactions with chain E- Hydrogen bonds: A:G.126, A:A.128, A:G.129, A:L.130, A:S.131, A:S.131, B:H.156, E:Q.115
- Water bridges: B:P.102
FUQ.3: 12 residues within 4Å:- Chain A: Q.100, S.103, S.104, D.107, G.126, G.127, A.128, M.148, P.149, P.150, K.152
- Ligands: 8M0.17
12 PLIP interactions:12 interactions with chain A- Hydrogen bonds: A:Q.100, A:S.103, A:S.103, A:S.103, A:S.103, A:D.107, A:G.127, A:K.152
- Water bridges: A:A.99, A:M.148, A:M.148, A:K.152
FUQ.12: 14 residues within 4Å:- Chain A: D.107, A.111, Q.115, V.124
- Chain C: G.126, G.127, A.128, G.129, L.130, S.131
- Chain D: P.102, A.155, H.156
- Ligands: 8M0.17
9 PLIP interactions:2 interactions with chain D, 6 interactions with chain C, 1 interactions with chain A- Hydrogen bonds: D:H.156, C:G.126, C:A.128, C:G.129, C:L.130, C:S.131, C:S.131, A:Q.115
- Water bridges: D:P.102
FUQ.13: 12 residues within 4Å:- Chain C: Q.100, S.103, S.104, D.107, G.126, G.127, A.128, M.148, P.149, P.150, K.152
- Ligands: 8M0.27
12 PLIP interactions:12 interactions with chain C- Hydrogen bonds: C:Q.100, C:S.103, C:S.103, C:S.103, C:S.103, C:D.107, C:G.127, C:K.152
- Water bridges: C:A.99, C:M.148, C:M.148, C:K.152
FUQ.22: 14 residues within 4Å:- Chain C: D.107, A.111, Q.115, V.124
- Chain E: G.126, G.127, A.128, G.129, L.130, S.131
- Chain F: P.102, A.155, H.156
- Ligands: 8M0.27
9 PLIP interactions:6 interactions with chain E, 1 interactions with chain C, 2 interactions with chain F- Hydrogen bonds: E:G.126, E:A.128, E:G.129, E:L.130, E:S.131, E:S.131, C:Q.115, F:H.156
- Water bridges: F:P.102
FUQ.23: 12 residues within 4Å:- Chain E: Q.100, S.103, S.104, D.107, G.126, G.127, A.128, M.148, P.149, P.150, K.152
- Ligands: 8M0.7
12 PLIP interactions:12 interactions with chain E- Hydrogen bonds: E:Q.100, E:S.103, E:S.103, E:S.103, E:S.103, E:D.107, E:G.127, E:K.152
- Water bridges: E:A.99, E:M.148, E:M.148, E:K.152
- 3 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.4: 4 residues within 4Å:- Chain A: R.209, E.241, H.261, I.265
2 PLIP interactions:2 interactions with chain A- Salt bridges: A:R.209, A:H.261
PO4.14: 4 residues within 4Å:- Chain C: R.209, E.241, H.261, I.265
2 PLIP interactions:2 interactions with chain C- Salt bridges: C:R.209, C:H.261
PO4.24: 4 residues within 4Å:- Chain E: R.209, E.241, H.261, I.265
2 PLIP interactions:2 interactions with chain E- Salt bridges: E:R.209, E:H.261
- 3 x MG: MAGNESIUM ION(Non-covalent)
MG.6: 4 residues within 4Å:- Chain B: D.170, E.189, P.226
- Ligands: ATP.5
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:E.189, B:P.226, H2O.8, H2O.8
MG.16: 4 residues within 4Å:- Chain D: D.170, E.189, P.226
- Ligands: ATP.15
4 PLIP interactions:2 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: D:E.189, D:P.226, H2O.21, H2O.21
MG.26: 4 residues within 4Å:- Chain F: D.170, E.189, P.226
- Ligands: ATP.25
4 PLIP interactions:2 interactions with chain F, 2 Ligand-Water interactions- Metal complexes: F:E.189, F:P.226, H2O.35, H2O.35
- 3 x 8M0: bis(mu4-oxo)-tetrakis(mu3-oxo)-hexakis(mu2-oxo)-hexadecaoxo-octamolybdenum (VI)(Non-covalent)
8M0.7: 16 residues within 4Å:- Chain B: P.102, A.105, S.106, G.109, Q.110, H.113, Y.126, E.128, H.129, P.130, S.149, P.152, P.153, A.155
- Ligands: FUQ.2, FUQ.23
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:A.105, B:Q.110, B:Y.126, B:H.129, B:S.149
- Water bridges: B:Y.126, B:V.127, B:Y.154, B:A.155
8M0.17: 16 residues within 4Å:- Chain D: P.102, A.105, S.106, G.109, Q.110, H.113, Y.126, E.128, H.129, P.130, S.149, P.152, P.153, A.155
- Ligands: FUQ.3, FUQ.12
9 PLIP interactions:9 interactions with chain D- Hydrogen bonds: D:A.105, D:Q.110, D:Y.126, D:H.129, D:S.149
- Water bridges: D:Y.126, D:V.127, D:Y.154, D:A.155
8M0.27: 16 residues within 4Å:- Chain F: P.102, A.105, S.106, G.109, Q.110, H.113, Y.126, E.128, H.129, P.130, S.149, P.152, P.153, A.155
- Ligands: FUQ.13, FUQ.22
9 PLIP interactions:9 interactions with chain F- Hydrogen bonds: F:A.105, F:Q.110, F:Y.126, F:H.129, F:S.149
- Water bridges: F:Y.126, F:V.127, F:Y.154, F:A.155
- 3 x MOO: MOLYBDATE ION(Non-covalent)
MOO.8: 7 residues within 4Å:- Chain B: T.131, H.139
- Chain D: H.139
- Chain F: I.138, H.139
- Ligands: MOO.18, MOO.28
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:H.139
MOO.18: 7 residues within 4Å:- Chain B: I.138, H.139
- Chain D: T.131, H.139
- Chain F: H.139
- Ligands: MOO.8, MOO.28
1 PLIP interactions:1 interactions with chain F- Hydrogen bonds: F:H.139
MOO.28: 7 residues within 4Å:- Chain B: H.139
- Chain D: I.138, H.139
- Chain F: T.131, H.139
- Ligands: MOO.8, MOO.18
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:H.139
- 6 x MO: MOLYBDENUM ATOM(Non-functional Binders)(Non-covalent)
MO.9: 4 residues within 4Å:- Ligands: MO.10, MO.19, MO.29, MO.30
Ligand excluded by PLIPMO.10: 3 residues within 4Å:- Chain B: T.131
- Ligands: MO.9, MO.19
Ligand excluded by PLIPMO.19: 4 residues within 4Å:- Ligands: MO.9, MO.10, MO.20, MO.29
Ligand excluded by PLIPMO.20: 3 residues within 4Å:- Chain D: T.131
- Ligands: MO.19, MO.29
Ligand excluded by PLIPMO.29: 4 residues within 4Å:- Ligands: MO.9, MO.19, MO.20, MO.30
Ligand excluded by PLIPMO.30: 3 residues within 4Å:- Chain F: T.131
- Ligands: MO.9, MO.29
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Brunle, S. et al., The molybdenum storage protein - A bionanolab for creating experimentally alterable polyoxomolybdate clusters. J. Inorg. Biochem. (2018)
- Release Date
- 2018-12-05
- Peptides
- Molybdenum storage protein subunit beta: ACE
Molybdenum storage protein subunit alpha: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BC
BE
BB
AD
AF
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 6 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 6 x FUQ: Mo5 Cluster(Non-covalent)
- 3 x PO4: PHOSPHATE ION(Non-functional Binders)
- 3 x MG: MAGNESIUM ION(Non-covalent)
- 3 x 8M0: bis(mu4-oxo)-tetrakis(mu3-oxo)-hexakis(mu2-oxo)-hexadecaoxo-octamolybdenum (VI)(Non-covalent)
- 3 x MOO: MOLYBDATE ION(Non-covalent)
- 6 x MO: MOLYBDENUM ATOM(Non-functional Binders)(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Brunle, S. et al., The molybdenum storage protein - A bionanolab for creating experimentally alterable polyoxomolybdate clusters. J. Inorg. Biochem. (2018)
- Release Date
- 2018-12-05
- Peptides
- Molybdenum storage protein subunit beta: ACE
Molybdenum storage protein subunit alpha: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BC
BE
BB
AD
AF
A