SMTL ID : 6hiw.1

Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete small mitoribosomal subunit in complex with mt-IF-3

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
3 x UNK- UNK- UNK- UNK- UNK: Unknown Protein(Non-covalent)
4 x ZN: ZINC ION(Non-covalent)
1 x UTP: URIDINE 5'-TRIPHOSPHATE(Non-covalent)
39 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
4 x SPD: SPERMIDINE(Non-covalent)
1 x SPM: SPERMINE(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Ramrath, D.J.F. et al., Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes. Science (2018)
Release Date
2018-09-26
Peptides
mS48: A
mS51: B
mS56: C
mS59: D
mS60: E
mS61: F
mS62: G
mS63: H
mS64: I
mS65: J
mS66: K
mS68: L
mS73: M
mS74: N
mS49: O
mS50: P
mS52: Q
mS53: R
mS54: S
mS55: T
mS57: U
mS58: V
mS67: W
mS69: X
mS70: Y
mS71: Z
mS72: 0
uS3m: 1
uS5m: 2
bS6m: 3
uS8m: 4
uS9m: 5
uS10m: 6
uS11m: 7
uS12m: 8
uS14m: 9
uS15m: a
bS16m: b
uS17m: c
bS18m: d
uS19m: e
bS21m: f
mt-IF-3: g
mS22: h
mS23: i
mS26: j
mS29: k
mS33: l
mS34: m
mS35: n
mS37: o
mS38: p
mS41: q
mS42: r
mS43: s
mS47: t
Unknown Protein: v
Unknown Protein: w
Unknown Protein: x
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
DA
B
DD
C
DI
D
DL
E
DM
F
DN
G
DO
H
DP
I
DQ
J
DR
K
DS
L
DU
M
DZ
N
Da
O
DB
P
DC
Q
DE
R
DF
S
DG
T
DH
U
DJ
V
DK
W
DT
X
DV
Y
DW
Z
DX
0
DY
1
CC
2
CE
3
CF
4
CH
5
CI
6
CJ
7
CK
8
CL
9
CN
a
CO
b
CP
c
CQ
d
CR
e
CS
f
CU
g
CZ
h
Ca
i
Cb
j
Cd
k
Cg
l
Ci
m
Cj
n
Ck
o
Cm
p
Cn
q
Cp
r
Cq
s
Cr
t
Cv
v
UQ
w
US
x
UT

mS48

mS51

mS56

mS59

mS60

mS61

mS62

mS63

mS64

mS65

mS66

mS68

mS73

mS74

mS49

mS50

mS52

mS53

mS54

mS55

mS57

mS58

mS67

mS69

mS70

mS71

mS72

uS3m

uS5m

bS6m

uS8m

uS9m

uS10m

uS11m

uS12m

uS14m

uS15m

bS16m

uS17m

bS18m

uS19m

bS21m

mt-IF-3

mS22

mS23

mS26

mS29

mS33

mS34

mS35

mS37

mS38

mS41

mS42

mS43

mS47

Unknown Protein

Unknown Protein

Unknown Protein

Related Entries With Identical Sequence

3jc2.1 | 4uq8.1 | 4v7r.57 | 4v7r.118 | 4wz7.1 | 5a5u.1 | 5cod.1 | 5cod.2 | 5cod.3 | 5cod.4 | 5cod.5 | 5cod.6 | 5dn6.1 | 5flz.1 | 5fm1.1 | 5j4z.36 | 5j7y.36 | 5j8k.36 | 5k1h.1 | 5lqx.1 | 5lqy.1 | 5lqz.1 | 5tj5.1 | 5vox.1 | 5voy.1 | 5voz.1 | 6h8k.18 | 6h8k.39 | 6hiv.1 | 6hiv.2  more...