SMTL ID : 6hiy.1

Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the body of the small mitoribosomal subunit in complex with mt-IF-3

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
1 x UNK- UNK- UNK- UNK- UNK- UNK- UNK- UNK: Unknown protein(Non-covalent)
4 x ZN: ZINC ION(Non-covalent)
36 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
2 x SPD: SPERMIDINE(Non-covalent)
1 x SPM: SPERMINE(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Ramrath, D.J.F. et al., Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes. Science (2018)
Release Date
2018-09-26
Peptides
mS48: A
mS51: B
mS56: C
mS59: D
mS60: E
mS61: F
mS62: G
mS63: H
mS64: I
mS65: J
mS66: K
mS68: L
mS73: M
mS74: N
mS55m: O
bS6m: P
uS8m: Q
uS9m: R
uS11m: S
uS12m: T
uS15m: U
bS16m: V
uS17m: W
bS18m: X
uS21m: Y
mt-IF-3: Z
mS22: 0
mS23: 1
mS26: 2
mS34: 3
mS37: 4
mS38: 5
mS41: 6
mS42: 7
mS43: 8
mS47: 9
Unknown protein: b
Unknown protein: c
Unknown protein: d
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
DA
B
DD
C
DI
D
DL
E
DM
F
DN
G
DO
H
DP
I
DQ
J
DR
K
DS
L
DU
M
DZ
N
Da
O
CE
P
CF
Q
CH
R
CI
S
CK
T
CL
U
CO
V
CP
W
CQ
X
CR
Y
CU
Z
CZ
0
Ca
1
Cb
2
Cd
3
Cj
4
Cm
5
Cn
6
Cp
7
Cq
8
Cr
9
Cv
b
UQ
c
US
d
UT

mS48

mS51

mS56

mS59

mS60

mS61

mS62

mS63

mS64

mS65

mS66

mS68

mS73

mS74

mS55m

bS6m

uS8m

uS9m

uS11m

uS12m

uS15m

bS16m

uS17m

bS18m

uS21m

mt-IF-3

mS22

mS23

mS26

mS34

mS37

mS38

mS41

mS42

mS43

mS47

Unknown protein

Unknown protein

Unknown protein

Related Entries With Identical Sequence

3jc2.1 | 4uq8.1 | 4v7r.57 | 4v7r.118 | 4wz7.1 | 5a5u.1 | 5cod.1 | 5cod.2 | 5cod.3 | 5cod.4 | 5cod.5 | 5cod.6 | 5dn6.1 | 5flz.1 | 5fm1.1 | 5j4z.36 | 5j7y.36 | 5j8k.36 | 5k1h.1 | 5lqx.1 | 5lqy.1 | 5lqz.1 | 5tj5.1 | 5vox.1 | 5voy.1 | 5voz.1 | 6h8k.18 | 6h8k.39 | 6hiv.1 | 6hiv.2  more...