SMTL ID : 7c9w.1 (3 other biounits)

E30 F-particle in complex with CD55

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x SPH: SPHINGOSINE(Non-covalent)

SPH.1: 13 residues within 4Å: Chain A: I.96, T.98, R.99, L.118, I.120, V.145, Y.147, P.169, M.182, I.184, Y.193, N.195, L.220 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.96, A:T.98, A:I.120, A:Y.147, A:Y.147, A:Y.147, A:I.184, A:I.184 Hydrogen bonds: A:R.99, A:R.99

1 x MYR: MYRISTIC ACID(Covalent)

MYR.2: 3 residues within 4Å: Chain D: G.1, A.2, Y.31 1 PLIP interactions: 1 interactions with chain D Hydrophobic interactions: D:Y.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, K. et al., Structures of Echovirus 30 in complex with its receptors inform a rational prediction for enterovirus receptor usage. Nat Commun (2020)

Release Date

2020-07-29

Peptides

VP1: A
VP2: B
VP3: C
VP4: D
Complement decay-accelerating factor: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

VP1

VP2

VP3

VP4

Complement decay-accelerating factor

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