SMTL ID : 6lnq.1

The co-crystal structure of SARS-CoV 3C Like Protease with aldehyde inhibitor M7

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.24 Å

Oligo State

monomer

Ligands

1 x EJF: N-[(2S)-3-methyl-1-[[(2S)-4-methyl-1-oxidanylidene-1-[[(2S)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-butan-2-yl]-1H-indole-2-carboxamide(Covalent)

EJF.1: 19 residues within 4Å: Chain A: H.41, Y.54, F.140, L.141, N.142, G.143, S.144, C.145, H.163, H.164, M.165, E.166, P.168, H.172, D.187, R.188, T.190, A.191, Q.192 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:H.41, A:M.165, A:P.168 Hydrogen bonds: A:F.140, A:G.143, A:S.144, A:S.144, A:C.145, A:H.164, A:E.166, A:E.166, A:Q.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, H. et al., Comprehensive Insights into the Catalytic Mechanism of Middle East Respiratory Syndrome 3C-Like Protease and Severe Acute Respiratory Syndrome 3C-Like Protease. Acs Catalysis (2020)

Release Date

2020-05-27

Peptides

Severe Acute Respiratory Syndrome Coronavirus 3c Like Protease: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Severe Acute Respiratory Syndrome Coronavirus 3c Like Protease

Related Entries With Identical Sequence