SMTL ID : 6nec.2 (1 other biounit)

STRUCTURE OF RET PROTEIN TYROSINE KINASE DOMAIN IN COMPLEX WITH NINTEDANIB

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.87 Å

Oligo State

monomer

Ligands

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.1: 4 residues within 4Å: Chain A: G.1, P.2, L.3, S.4 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.1, A:L.3, A:S.4

1 x XIN: methyl (3Z)-3-{[(4-{methyl[(4-methylpiperazin-1-yl)acetyl]amino}phenyl)amino](phenyl)methylidene}-2-oxo-2,3-dihydro-1H-indole-6-carboxylate(Non-covalent)

XIN.2: 21 residues within 4Å: Chain A: K.29, T.30, L.31, G.32, E.33, V.39, A.57, K.59, E.76, L.80, I.89, V.105, E.106, Y.107, A.108, K.109, Y.110, G.111, L.182, S.192, D.193 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.31, A:V.39, A:V.39, A:V.105, A:L.182, A:L.182 Hydrogen bonds: A:E.106, A:A.108, A:A.108, A:D.193 Salt bridges: A:K.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Terzyan, S.S. et al., Structural basis of resistance of mutant RET protein-tyrosine kinase to its inhibitors nintedanib and vandetanib. J.Biol.Chem. (2019)

Release Date

2019-06-05

Peptides

Proto-oncogene tyrosine-protein kinase receptor Ret: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Proto-oncogene tyrosine-protein kinase receptor Ret

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