SMTL ID : 6o3g.2 (3 other biounits)

Crystal structure of the Fab fragment of the human HIV-1 neutralizing antibody PGZL1 in complex with its MPER peptide epitope (region 671-683 of HIV-1 gp41).

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.64 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain B: T.28, F.29, S.30 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:F.29, B:S.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, L. et al., An MPER antibody neutralizes HIV-1 using germline features shared among donors. Nat Commun (2019)

Release Date

2019-12-04

Peptides

PGZL1 light chain: A
PGZL1 heavy chain: B
MEPER peptide, region 671-683 of HIV-1 gp41: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

C
I

PGZL1 light chain

PGZL1 heavy chain

MEPER peptide, region 671-683 of HIV-1 gp41

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